RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 IDI2Q9BXS1 227 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 INPP5BP32019 993 aa11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 TM4SF4P48230 202 aa11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 EMP3P54852 163 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 TEX11Q8IYF3 940 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MYH13Q9UKX3 1938 aa11.24□□□□□ -0.61
RFX3-AS1-202ENST00000427722 DDTLA6NHG4 134 aaPredicted RBP11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 BAG3O95817 575 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CYP7A1P22680 504 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ERO1BQ86YB8 467 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SH3RF3Q8TEJ3 882 aaPredicted RBP11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CCL15-CCL14A0A0B4J2E2 113 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAP4K4O95819 1239 aaPredicted RBP11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 GTF2A2P52657 109 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 INHBEP58166 350 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 PPIL2Q13356 520 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 DGKZQ13574 1117 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CCL15Q16663 113 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZNF296Q8WUU4 475 aaPredicted RBP11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 R3HDMLQ9H3Y0 253 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZNF112Q9UJU3 913 aa11.22□□□□□ -0.61
RFX3-AS1-202ENST00000427722 OTOFQ9HC10 1997 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 FLT1P17948 1338 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 GPR25O00155 361 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 GOLIM4O00461 696 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 IRF6O14896 467 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ABHD8Q96I13 439 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 PTPN18Q99952 460 aa11.21□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAST2Q6P0Q8 1798 aa11.21□□□□□ -0.62
RFX3-AS1-202ENST00000427722 COL2A1P02458 1487 aaPredicted RBP11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 IGSF3O75054 1194 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 CETPP11597 493 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PPP4CP60510 307 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PPATQ06203 517 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 CRHR2Q13324 411 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 SCYL3Q8IZE3 742 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 FAM43AQ8N2R8 423 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 EDC3Q96F86 508 aaKnown RBP11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 BOLA2Q9H3K6 86 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PHF20L1A8MW92 1017 aa11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 FKTNO75072 461 aa11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 PDE6AP16499 860 aa11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 TAF1CQ15572 869 aaPredicted RBP11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
RFX3-AS1-202ENST00000427722 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
RFX3-AS1-202ENST00000427722 ATP5JP18859 108 aa11.18□□□□□ -0.62
RFX3-AS1-202ENST00000427722 USP5P45974 858 aa11.18□□□□□ -0.62
RFX3-AS1-202ENST00000427722 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
RFX3-AS1-202ENST00000427722 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
RFX3-AS1-202ENST00000427722 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms