RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 HSPA4P34932 840 aa18.31■□□□□ 0.52
COL11A1-204ENST00000427239 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
COL11A1-204ENST00000427239 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
COL11A1-204ENST00000427239 SWAP70Q9UH65 585 aa18.31■□□□□ 0.52
COL11A1-204ENST00000427239 NF2P35240 595 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 PDE4BQ07343 736 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 SLC4A8Q2Y0W8 1093 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 DCAF15Q66K64 600 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
COL11A1-204ENST00000427239 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
COL11A1-204ENST00000427239 POLR2AP24928 1970 aaKnown RBP18.29■□□□□ 0.52
COL11A1-204ENST00000427239 SLC27A2O14975 620 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 HAND2P61296 217 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 GABPAQ06546 454 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 C16orf86Q6ZW13 317 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 RBM46Q8TBY0 533 aaKnown RBP18.29■□□□□ 0.52
COL11A1-204ENST00000427239 CDCA5Q96FF9 252 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 ROBO3Q96MS0 1386 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 ITGBL1O95965 494 aaPredicted RBP18.29■□□□□ 0.52
COL11A1-204ENST00000427239 FGRP09769 529 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 NT5C2P49902 561 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 KCNB2Q92953 911 aa18.29■□□□□ 0.52
COL11A1-204ENST00000427239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL11A1-204ENST00000427239 MYH1P12882 1939 aa18.28■□□□□ 0.52
COL11A1-204ENST00000427239 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
COL11A1-204ENST00000427239 MIGA2Q7L4E1 593 aa18.28■□□□□ 0.52
COL11A1-204ENST00000427239 STAG1Q8WVM7 1258 aa18.28■□□□□ 0.52
COL11A1-204ENST00000427239 DYNLL2Q96FJ2 89 aa18.28■□□□□ 0.52
COL11A1-204ENST00000427239 MKNK2Q9HBH9 465 aa18.28■□□□□ 0.52
COL11A1-204ENST00000427239 BAZ2AQ9UIF9 1905 aaKnown RBP18.28■□□□□ 0.52
COL11A1-204ENST00000427239 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 CDK8P49336 464 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 EVX2Q03828 476 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 KRT32Q14532 448 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.52
COL11A1-204ENST00000427239 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
COL11A1-204ENST00000427239 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 ANAPC15P60006 121 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 TRDNQ13061 729 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 DLK2Q6UY11 383 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 TRAF5O00463 557 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 ORC4O43929 436 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 FSTL1Q12841 308 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
COL11A1-204ENST00000427239 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 KRT23Q9C075 422 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 DNAJC18Q9H819 358 aa18.26■□□□□ 0.51
COL11A1-204ENST00000427239 E7EWF7 191 aa18.25■□□□□ 0.51
COL11A1-204ENST00000427239 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
COL11A1-204ENST00000427239 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
COL11A1-204ENST00000427239 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
COL11A1-204ENST00000427239 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
COL11A1-204ENST00000427239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL11A1-204ENST00000427239 SHMT1P34896 483 aa18.24■□□□□ 0.51
COL11A1-204ENST00000427239 RBM25P49756 843 aaKnown RBP18.24■□□□□ 0.51
COL11A1-204ENST00000427239 FKBP1BP68106 108 aa18.24■□□□□ 0.51
COL11A1-204ENST00000427239 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
COL11A1-204ENST00000427239 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
COL11A1-204ENST00000427239 ZNF112Q9UJU3 913 aa18.24■□□□□ 0.51
COL11A1-204ENST00000427239 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
COL11A1-204ENST00000427239 PHF20L1A8MW92 1017 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 USP2O75604 605 aaPredicted RBP18.23■□□□□ 0.51
COL11A1-204ENST00000427239 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
COL11A1-204ENST00000427239 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 ESR2Q92731 530 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 UNCXA6NJT0 531 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 FAM196BA6NMK8 535 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
COL11A1-204ENST00000427239 PRDM1O75626 825 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 HMGB1P09429 215 aaKnown RBP18.23■□□□□ 0.51
COL11A1-204ENST00000427239 RASA1P20936 1047 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 PSMA5P28066 241 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 RALYLQ86SE5 291 aaKnown RBP18.23■□□□□ 0.51
COL11A1-204ENST00000427239 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
COL11A1-204ENST00000427239 PASKQ96RG2 1323 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 RANBP6O60518 1105 aaKnown RBP18.22■□□□□ 0.51
COL11A1-204ENST00000427239 CELF2O95319 508 aaKnown RBP18.22■□□□□ 0.51
COL11A1-204ENST00000427239 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 ZNF408Q9H9D4 720 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 TACC3Q9Y6A5 838 aa18.22■□□□□ 0.51
COL11A1-204ENST00000427239 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms