RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 TRIM17Q9Y577 477 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 FLT1P17948 1338 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 PDHXO00330 501 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 GOLIM4O00461 696 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 CAP2P40123 477 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 RGS19P49795 217 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 MOGSQ13724 837 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 METTL16Q86W50 562 aaKnown RBP13.07□□□□□ -0.32
LINC01238-202ENST00000426962 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
LINC01238-202ENST00000426962 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
LINC01238-202ENST00000426962 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
LINC01238-202ENST00000426962 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 USP5P45974 858 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
LINC01238-202ENST00000426962 HAUS7Q99871 368 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
LINC01238-202ENST00000426962 MAGEB6P1A0A0J9YX57 407 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 PDE6AP16499 860 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 RRP1BQ14684 758 aaKnown RBP13.05□□□□□ -0.32
LINC01238-202ENST00000426962 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
LINC01238-202ENST00000426962 EDC3Q96F86 508 aaKnown RBP13.05□□□□□ -0.32
LINC01238-202ENST00000426962 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
LINC01238-202ENST00000426962 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
LINC01238-202ENST00000426962 PTPN22Q9Y2R2 807 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
LINC01238-202ENST00000426962 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
LINC01238-202ENST00000426962 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 SPP2Q13103 211 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 KIF22Q14807 665 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01238-202ENST00000426962 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
LINC01238-202ENST00000426962 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
LINC01238-202ENST00000426962 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 ASNSP08243 561 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 ADD2P35612 726 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
LINC01238-202ENST00000426962 CAP1Q01518 475 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
LINC01238-202ENST00000426962 PARK7Q99497 189 aaKnown RBP13.03□□□□□ -0.32
LINC01238-202ENST00000426962 CRNKL1Q9BZJ0 848 aaKnown RBP13.03□□□□□ -0.32
LINC01238-202ENST00000426962 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 CPA4Q9UI42 421 aa13.03□□□□□ -0.32
LINC01238-202ENST00000426962 GNRH1P01148 92 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 CYP2C8P10632 490 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 SLC4A8Q2Y0W8 1093 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
LINC01238-202ENST00000426962 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 WDR18Q9BV38 432 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 EHD4Q9H223 541 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
LINC01238-202ENST00000426962 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
LINC01238-202ENST00000426962 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
LINC01238-202ENST00000426962 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
LINC01238-202ENST00000426962 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
LINC01238-202ENST00000426962 TATDN1Q6P1N9 297 aa13.01□□□□□ -0.33
LINC01238-202ENST00000426962 ADGRA2Q96PE1 1338 aa13.01□□□□□ -0.33
LINC01238-202ENST00000426962 C19orf81C9J6K1 198 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 GDF11O95390 407 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 BCRP11274 1271 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 HOXD10P28358 340 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 PSMC4P43686 418 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 PLCD1P51178 756 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 SOX10P56693 466 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 BACE1P56817 501 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 JAG1P78504 1218 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01238-202ENST00000426962 AAMPQ13685 434 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 LCORLQ8N3X6 602 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 ARMT1Q9H993 441 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 DCP1AQ9NPI6 582 aaPredicted RBP13□□□□□ -0.33
LINC01238-202ENST00000426962 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
LINC01238-202ENST00000426962 USP17L10C9JJH3 530 aa12.99□□□□□ -0.33
LINC01238-202ENST00000426962 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
LINC01238-202ENST00000426962 HMGCS2P54868 508 aa12.99□□□□□ -0.33
LINC01238-202ENST00000426962 PRMT2P55345 433 aa12.99□□□□□ -0.33
LINC01238-202ENST00000426962 SLFNL1Q499Z3 407 aa12.99□□□□□ -0.33
LINC01238-202ENST00000426962 CERKLQ49MI3 558 aaPredicted RBP12.99□□□□□ -0.33
LINC01238-202ENST00000426962 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms