RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
SNX3-204ENST00000426155 IGSF3O75054 1194 aa16.53■□□□□ 0.24
SNX3-204ENST00000426155 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
SNX3-204ENST00000426155 CCL15Q16663 113 aa16.53■□□□□ 0.24
SNX3-204ENST00000426155 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
SNX3-204ENST00000426155 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
SNX3-204ENST00000426155 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
SNX3-204ENST00000426155 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.24
SNX3-204ENST00000426155 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
SNX3-204ENST00000426155 PPIL2Q13356 520 aa16.52■□□□□ 0.24
SNX3-204ENST00000426155 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
SNX3-204ENST00000426155 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.24
SNX3-204ENST00000426155 DNAJC18Q9H819 358 aa16.52■□□□□ 0.24
SNX3-204ENST00000426155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNX3-204ENST00000426155 MYH8P13535 1937 aa16.52■□□□□ 0.23
SNX3-204ENST00000426155 ADD2P35612 726 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 USP5P45974 858 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 GTF2A2P52657 109 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 PPATQ06203 517 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 LCORLQ8N3X6 602 aa16.51■□□□□ 0.23
SNX3-204ENST00000426155 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 IGHDP01880 384 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 INHBEP58166 350 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 EVX2Q03828 476 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 SHROOM1Q2M3G4 852 aaPredicted RBP16.5■□□□□ 0.23
SNX3-204ENST00000426155 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 GPATCH3Q96I76 525 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 LOC285556D6RIA3 1793 aa16.5■□□□□ 0.23
SNX3-204ENST00000426155 TBC1D12O60347 775 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 MBD4O95243 580 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 PTPRAP18433 802 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 CRHR2Q13324 411 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 SNAPC2Q13487 334 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 PI4K2BQ8TCG2 481 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
SNX3-204ENST00000426155 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
SNX3-204ENST00000426155 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 GPR25O00155 361 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 MX1P20591 662 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 JAG1P78504 1218 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 CFHR5Q9BXR6 569 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNX3-204ENST00000426155 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
SNX3-204ENST00000426155 PICK1Q9NRD5 415 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 KCNH4Q9UQ05 1017 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
SNX3-204ENST00000426155 TTC41PQ6P2S7 1318 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 PRKAB2O43741 272 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
SNX3-204ENST00000426155 GDF11O95390 407 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 CETPP11597 493 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 MOGSQ13724 837 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
SNX3-204ENST00000426155 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
SNX3-204ENST00000426155 MCOLN1Q9GZU1 580 aa16.47■□□□□ 0.23
SNX3-204ENST00000426155 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
SNX3-204ENST00000426155 HERC5Q9UII4 1024 aaKnown RBP16.47■□□□□ 0.23
SNX3-204ENST00000426155 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 DGKZQ13574 1117 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 AAMPQ13685 434 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 TAF1CQ15572 869 aaPredicted RBP16.46■□□□□ 0.23
SNX3-204ENST00000426155 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 CERS3Q8IU89 383 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
SNX3-204ENST00000426155 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
SNX3-204ENST00000426155 CYP2D6P10635 497 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 CAP2P40123 477 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 PLCD1P51178 756 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 UBE3CQ15386 1083 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
SNX3-204ENST00000426155 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 TRIM34Q9BYJ4 488 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
SNX3-204ENST00000426155 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
SNX3-204ENST00000426155 AFG3L2Q9Y4W6 797 aa16.45■□□□□ 0.22
SNX3-204ENST00000426155 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 FKTNO75072 461 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 CAP1Q01518 475 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 POTEHQ6S545 545 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 ABHD8Q96I13 439 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 DCP1AQ9NPI6 582 aaPredicted RBP16.44■□□□□ 0.22
SNX3-204ENST00000426155 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
SNX3-204ENST00000426155 A0A0G2JLL6 359 aaPredicted RBP16.43■□□□□ 0.22
SNX3-204ENST00000426155 CXCL11O14625 94 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 ERC2O15083 957 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 GLRX3O76003 335 aaKnown RBP16.43■□□□□ 0.22
SNX3-204ENST00000426155 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms