RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PDE6AP16499 860 aa22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 SLC9C2Q5TAH2 1124 aa22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 GPAT2Q6NUI2 795 aa22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 HAUS7Q99871 368 aa22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 DNAJC18Q9H819 358 aa22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 ZCCHC17Q9NP64 241 aaKnown RBP22.29■■□□□ 1.16
SMARCAL1-205ENST00000425815 JAG1P78504 1218 aa22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 SP3Q02447 781 aa22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 PKN2Q16513 984 aaKnown RBP22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 SLFNL1Q499Z3 407 aa22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 ANKRD23Q86SG2 305 aa22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 SAP30BPQ9UHR5 308 aaKnown RBP22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 MYO5AQ9Y4I1 1855 aaKnown RBP22.28■■□□□ 1.16
SMARCAL1-205ENST00000425815 TLR2O60603 784 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 CHGBP05060 677 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 CAP2P40123 477 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 FOXP4Q8IVH2 680 aaPredicted RBP22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 CD99L2Q8TCZ2 262 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 HERC5Q9UII4 1024 aaKnown RBP22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
SMARCAL1-205ENST00000425815 AK9Q5TCS8 1911 aa22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 MAST2Q6P0Q8 1798 aa22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 A0A0G2JLL6 359 aaPredicted RBP22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 PDHXO00330 501 aa22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 OTOP1Q7RTM1 612 aa22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 PRRT2Q7Z6L0 340 aaPredicted RBP22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
SMARCAL1-205ENST00000425815 DOCK2Q92608 1830 aa22.25■■□□□ 1.15
SMARCAL1-205ENST00000425815 CERS3Q8IU89 383 aa22.25■■□□□ 1.15
SMARCAL1-205ENST00000425815 ERO1AQ96HE7 468 aa22.25■■□□□ 1.15
SMARCAL1-205ENST00000425815 MAGEB6P1A0A0J9YX57 407 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 USP5P45974 858 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 SHROOM1Q2M3G4 852 aaPredicted RBP22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 SLC4A8Q2Y0W8 1093 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 FBXO46Q6PJ61 603 aaPredicted RBP22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 C17orf99Q6UX52 265 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 TRIM17Q9Y577 477 aa22.24■■□□□ 1.15
SMARCAL1-205ENST00000425815 TRIM75PA6NK02 468 aa22.23■■□□□ 1.15
SMARCAL1-205ENST00000425815 ADD2P35612 726 aa22.23■■□□□ 1.15
SMARCAL1-205ENST00000425815 ADGRA2Q96PE1 1338 aa22.23■■□□□ 1.15
SMARCAL1-205ENST00000425815 TSHZ3Q63HK5 1081 aa22.22■■□□□ 1.15
SMARCAL1-205ENST00000425815 FASTKD5Q7L8L6 764 aaKnown RBP22.22■■□□□ 1.15
SMARCAL1-205ENST00000425815 LCORLQ8N3X6 602 aa22.22■■□□□ 1.15
SMARCAL1-205ENST00000425815 RGS19P49795 217 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 PLCD1P51178 756 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 SPP2Q13103 211 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 ARHGAP39Q9C0H5 1083 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 EFCC1Q9HA90 598 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 CPA4Q9UI42 421 aa22.21■■□□□ 1.15
SMARCAL1-205ENST00000425815 SIPA1L1O43166 1804 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 USP17L5A8MUK1 530 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 HLA-DOAP06340 250 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 CYP2C8P10632 490 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 EVX2Q03828 476 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 TATDN1Q6P1N9 297 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 ZNF280CQ8ND82 737 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 OTUD7AQ8TE49 926 aaPredicted RBP22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 PTPN22Q9Y2R2 807 aa22.2■■□□□ 1.14
SMARCAL1-205ENST00000425815 PRKAB2O43741 272 aa22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 GDF11O95390 407 aa22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 CTGFP29279 349 aa22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 GADL1Q6ZQY3 521 aa22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 CRACR2BQ8N4Y2 399 aaPredicted RBP22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 ARMT1Q9H993 441 aa22.19■■□□□ 1.14
SMARCAL1-205ENST00000425815 LACTBP83111 547 aaPredicted RBP22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 UBE3CQ15386 1083 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 TREML2Q5T2D2 321 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 SDR42E1Q8WUS8 393 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 WDR18Q9BV38 432 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 CRNKL1Q9BZJ0 848 aaKnown RBP22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 EHD4Q9H223 541 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 DCP1AQ9NPI6 582 aaPredicted RBP22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 SLC45A1Q9Y2W3 748 aa22.18■■□□□ 1.14
SMARCAL1-205ENST00000425815 HTTP42858 3142 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 GABPAQ06546 454 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 SH3D19Q5HYK7 790 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 TTC6Q86TZ1 520 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 TBC1D2Q9BYX2 928 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 PUS7LQ9H0K6 701 aaKnown RBP22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 SERPINB13Q9UIV8 391 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 AGTPBP1Q9UPW5 1226 aa22.17■■□□□ 1.14
SMARCAL1-205ENST00000425815 CDK5RAP2Q96SN8 1893 aa22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 MBD4O95243 580 aa22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 ASNSP08243 561 aa22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 BCRP11274 1271 aa22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 PROCA1Q8NCQ7 364 aaPredicted RBP22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 PARK7Q99497 189 aaKnown RBP22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
SMARCAL1-205ENST00000425815 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 PHIPQ8WWQ0 1821 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 CYP2D6P10635 497 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 SHMT1P34896 483 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 HMGCS2P54868 508 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 SOX10P56693 466 aa22.15■■□□□ 1.14
SMARCAL1-205ENST00000425815 KBTBD3Q8NAB2 608 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms