RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LARP7Q4G0J3 582 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B1-205ENST00000424674 NXPE4Q6UWF7 544 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 FBF1Q8TES7 1133 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 UBA5Q9GZZ9 404 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 LGR6Q9HBX8 967 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 SLC52A1Q9NWF4 448 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 KLHL42Q9P2K6 505 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 ZC3H7BQ9UGR2 993 aaKnown RBP5□□□□□ -1.61
SF3B1-205ENST00000424674 AKAP2Q9Y2D5 859 aa5□□□□□ -1.61
SF3B1-205ENST00000424674 ATP2B1P20020 1258 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 ITGAEP38570 1179 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 CDK5R2Q13319 367 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 CYP27C1Q4G0S4 372 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 SPTY2D1Q68D10 685 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-205ENST00000424674 OGFOD3Q6PK18 319 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 NFXL1Q6ZNB6 911 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 ZSCAN29Q8IWY8 852 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-205ENST00000424674 TP53INP2Q8IXH6 220 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 SMC5Q8IY18 1101 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 SMYD4Q8IYR2 804 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-205ENST00000424674 SLC43A3Q8NBI5 491 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 C3orf58Q8NDZ4 430 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 FLCNQ8NFG4 579 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 GPATCH3Q96I76 525 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 FMNL2Q96PY5 1086 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 PLCD4Q9BRC7 762 aa4.99□□□□□ -1.61
SF3B1-205ENST00000424674 CENPBP07199 599 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-205ENST00000424674 HCLS1P14317 486 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-205ENST00000424674 NME2P22392 152 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 GSTT1P30711 240 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 TXKP42681 527 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 HDLBPQ00341 1268 aaKnown RBP4.98□□□□□ -1.61
SF3B1-205ENST00000424674 FMR1Q06787 632 aaKnown RBP eCLIP4.98□□□□□ -1.613e-8■■□□□ 13.3
SF3B1-205ENST00000424674 TTLL4Q14679 1199 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 RALBP1Q15311 655 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 AGBL5Q8NDL9 886 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 STK35Q8TDR2 534 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 ASB16Q96NS5 453 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 EMILIN2Q9BXX0 1053 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 SRCIN1Q9C0H9 1055 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 DISC1Q9NRI5 854 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 RNF19AQ9NV58 838 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 NOP58Q9Y2X3 529 aaKnown RBP4.98□□□□□ -1.61
SF3B1-205ENST00000424674 TBX22Q9Y458 520 aa4.98□□□□□ -1.61
SF3B1-205ENST00000424674 CCDC194A0A1B0GVG4 234 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
SF3B1-205ENST00000424674 FAM87AP0C7U9 286 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 ARNTP27540 789 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 ATP2B2Q01814 1243 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 CCDC144BQ3MJ40 725 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 RNF187Q5TA31 235 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-205ENST00000424674 SOGA3Q5TF21 947 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 MAP1SQ66K74 1059 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-205ENST00000424674 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 CCAR1Q8IX12 1150 aaKnown RBP4.97□□□□□ -1.61
SF3B1-205ENST00000424674 ACSBG1Q96GR2 724 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 NECAB3Q96P71 396 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-205ENST00000424674 GOLGA2P5Q9HBQ8 144 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 CBX8Q9HC52 389 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 RNF114Q9Y508 228 aa4.97□□□□□ -1.61
SF3B1-205ENST00000424674 NEFMP07197 916 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 P4HBP07237 508 aaKnown RBP4.96□□□□□ -1.62
SF3B1-205ENST00000424674 GTF2F1P35269 517 aaKnown RBP eCLIP4.96□□□□□ -1.62
SF3B1-205ENST00000424674 ERVK-24P63145 666 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 ZNF252P-AS1Q0IIN9 211 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 GNL2Q13823 731 aaKnown RBP4.96□□□□□ -1.62
SF3B1-205ENST00000424674 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 ALG1LQ6GMV1 187 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 CBLL1Q75N03 491 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 STK11IPQ8N1F8 1099 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 GPBAR1Q8TDU6 330 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 TINF2Q9BSI4 451 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 PCGF6Q9BYE7 350 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 BACH2Q9BYV9 841 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 CEP44Q9C0F1 390 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-205ENST00000424674 PCOLCE2Q9UKZ9 415 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 SLC5A6Q9Y289 635 aa4.96□□□□□ -1.62
SF3B1-205ENST00000424674 ENC1O14682 589 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 PEX14O75381 377 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 FBXO24O75426 580 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 PARNO95453 639 aaKnown RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 FGD1P98174 961 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 EAPPQ56P03 285 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 ZC3H12AQ5D1E8 599 aaKnown RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 APBB1IPQ7Z5R6 666 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 RNF214Q8ND24 703 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 BCL7CQ8WUZ0 217 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 DHX38Q92620 1227 aaKnown RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 ISL2Q96A47 359 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 MISP3Q96FF7 219 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 CCSER2Q9H7U1 834 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 SSU72Q9NP77 194 aaKnown RBP4.95□□□□□ -1.62
SF3B1-205ENST00000424674 SPG7Q9UQ90 795 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 SAMM50Q9Y512 469 aa4.95□□□□□ -1.62
SF3B1-205ENST00000424674 A0A0U1RQG5 324 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 GIPC1O14908 333 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms