RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 PLEKHM2Q8IWE5 1019 aa13.2□□□□□ -0.3
TOP3B-203ENST00000424393 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
TOP3B-203ENST00000424393 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
TOP3B-203ENST00000424393 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
TOP3B-203ENST00000424393 PALD1Q9ULE6 856 aa13.2□□□□□ -0.3
TOP3B-203ENST00000424393 CSADQ9Y600 493 aa13.2□□□□□ -0.3
TOP3B-203ENST00000424393 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 SPDYE5A6NIY4 337 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
TOP3B-203ENST00000424393 TBC1D12O60347 775 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-203ENST00000424393 PDE4AP27815 886 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
TOP3B-203ENST00000424393 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 OPTNQ96CV9 577 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
TOP3B-203ENST00000424393 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
TOP3B-203ENST00000424393 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
TOP3B-203ENST00000424393 BAZ2AQ9UIF9 1905 aaKnown RBP13.18□□□□□ -0.3
TOP3B-203ENST00000424393 PRKAB2O43741 272 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 METTL16Q86W50 562 aaKnown RBP13.18□□□□□ -0.3
TOP3B-203ENST00000424393 APPBP2Q92624 585 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 DNAJC18Q9H819 358 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.18□□□□□ -0.3
TOP3B-203ENST00000424393 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
TOP3B-203ENST00000424393 TNRC18O15417 2968 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 TM4SF4P48230 202 aa13.17□□□□□ -0.3
TOP3B-203ENST00000424393 RRP1BQ14684 758 aaKnown RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 ERO1BQ86YB8 467 aa13.17□□□□□ -0.3
TOP3B-203ENST00000424393 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
TOP3B-203ENST00000424393 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
TOP3B-203ENST00000424393 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
TOP3B-203ENST00000424393 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 M0R2C6 588 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 CTNND1O60716 968 aaKnown RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 TRPA1O75762 1119 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 EVX2Q03828 476 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 PPATQ06203 517 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 PPIL2Q13356 520 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-203ENST00000424393 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
TOP3B-203ENST00000424393 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-203ENST00000424393 IRF6O14896 467 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-203ENST00000424393 CYP2D6P10635 497 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 PLCD1P51178 756 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 SREBF2Q12772 1141 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
TOP3B-203ENST00000424393 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-203ENST00000424393 EHD4Q9H223 541 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
TOP3B-203ENST00000424393 PTPRFP10586 1907 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
TOP3B-203ENST00000424393 GPAA1O43292 621 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 PTPRAP18433 802 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 CAP2P40123 477 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 JAG1P78504 1218 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-203ENST00000424393 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 PTPN18Q99952 460 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 KCNH4Q9UQ05 1017 aa13.14□□□□□ -0.31
TOP3B-203ENST00000424393 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
TOP3B-203ENST00000424393 GTF2A2P52657 109 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 INHBEP58166 350 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 GABPAQ06546 454 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
TOP3B-203ENST00000424393 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 PICK1Q9NRD5 415 aa13.13□□□□□ -0.31
TOP3B-203ENST00000424393 MYH8P13535 1937 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 USP17L21D6R901 530 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 GDF11O95390 407 aa13.12□□□□□ -0.31
TOP3B-203ENST00000424393 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms