RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 KRBA2Q6ZNG9 492 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 CNNM3Q8NE01 707 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 IGDCC4Q8TDY8 1250 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 GPR101Q96P66 508 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 GSG1L2A8MUP6 293 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 POLR2DO15514 142 aaKnown RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 CHRNDQ07001 517 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 SYT10Q6XYQ8 523 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 CPLX3Q8WVH0 158 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 LPIN2Q92539 896 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-204ENST00000423698 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
ERCC1-204ENST00000423698 ANKRD65E5RJM6 399 aa13.52□□□□□ -0.24
ERCC1-204ENST00000423698 PRR29P0C7W0 189 aa13.52□□□□□ -0.24
ERCC1-204ENST00000423698 EEF2KMTQ96G04 330 aa13.52□□□□□ -0.24
ERCC1-204ENST00000423698 FANCLQ9NW38 375 aa13.52□□□□□ -0.24
ERCC1-204ENST00000423698 CDC25AP30304 524 aa13.52□□□□□ -0.25
ERCC1-204ENST00000423698 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
ERCC1-204ENST00000423698 FAM193AP78312 1265 aa13.52□□□□□ -0.25
ERCC1-204ENST00000423698 PDE4BQ07343 736 aa13.52□□□□□ -0.25
ERCC1-204ENST00000423698 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-204ENST00000423698 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
ERCC1-204ENST00000423698 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.25
ERCC1-204ENST00000423698 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 WTAPQ15007 396 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 DDB1Q16531 1140 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-204ENST00000423698 CLCN6P51797 869 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 UBAC1Q9BSL1 405 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
ERCC1-204ENST00000423698 TULP2O00295 520 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 CTAGE5O15320 804 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 ARMCX5Q6P1M9 558 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 ERICH2A1L162 156 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 WNT7AO00755 349 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 CYP2C19P33261 490 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 RTN1Q16799 776 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 EARS2Q5JPH6 523 aaKnown RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.5□□□□□ -0.251e-323■□□□□ 11
ERCC1-204ENST00000423698 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 MAPK8IP1Q9UQF2 711 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 PLEKHA8P1O95397 391 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 CYP2D6P10635 497 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 SIK1P57059 783 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 CCZ1BP86790 482 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 FANCCQ00597 558 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 SLC39A14Q15043 492 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 DHX58Q96C10 678 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 PLIN2Q99541 437 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
ERCC1-204ENST00000423698 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
ERCC1-204ENST00000423698 SLU7O95391 586 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 ADKP55263 362 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 UBASH3AP57075 661 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 SMARCE1Q969G3 411 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.254e-8■□□□□ 10.4
ERCC1-204ENST00000423698 SFPQP23246 707 aaKnown RBP eCLIP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 ZNF174Q15697 407 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
ERCC1-204ENST00000423698 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
ERCC1-204ENST00000423698 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 PLA2G4AP47712 749 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 NTRK3Q16288 839 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
ERCC1-204ENST00000423698 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-204ENST00000423698 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms