RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PICALMQ13492 652 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 DZIP1Q86YF9 867 aaKnown RBP20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 ZNF280CQ8ND82 737 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 SSH1Q8WYL5 1049 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 C11orf49Q9H6J7 331 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 MAGEA10P43363 369 aaPredicted RBP20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 TRIM32Q13049 653 aa20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 SPTY2D1Q68D10 685 aaPredicted RBP20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 TDHQ8IZJ6 230 aa20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 MTMR10Q9NXD2 777 aa20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 ABCF2Q9UG63 623 aa20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 MROH7-TTC4A0A0A0MT08 1334 aa20.8■□□□□ 0.92
CHCHD3-202ENST00000423635 ADORA1P30542 326 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 RASGRF1Q13972 1273 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 SH3D19Q5HYK7 790 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 MAP3K21Q5TCX8 1036 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 Q7L0L9 218 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 MORF4L1Q9UBU8 362 aa20.79■□□□□ 0.92
CHCHD3-202ENST00000423635 MAP4K4O95819 1239 aaPredicted RBP20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 SYN1P17600 705 aa20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 ASCC2Q9H1I8 757 aaPredicted RBP20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 CAP2P40123 477 aa20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 HMGCS2P54868 508 aa20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 TRIB2Q92519 343 aa20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
CHCHD3-202ENST00000423635 FAM196BA6NMK8 535 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 USP17L5A8MUK1 530 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 XRCC5P13010 732 aaKnown RBP20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 TIMM10P62072 90 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 MECOMQ03112 1051 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 ZNF384Q8TF68 577 aa20.77■□□□□ 0.91
CHCHD3-202ENST00000423635 LOC285556D6RIA3 1793 aa20.76■□□□□ 0.91
CHCHD3-202ENST00000423635 RRP1BQ14684 758 aaKnown RBP20.76■□□□□ 0.91
CHCHD3-202ENST00000423635 UBE2OQ9C0C9 1292 aaKnown RBP20.76■□□□□ 0.91
CHCHD3-202ENST00000423635 PA2G4Q9UQ80 394 aaKnown RBP20.76■□□□□ 0.91
CHCHD3-202ENST00000423635 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 PFASO15067 1338 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 DDX60LQ5H9U9 1706 aaKnown RBP20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 UNC80Q8N2C7 3258 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 ANP32CO43423 234 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 COL6A1P12109 1028 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 HOXA7P31268 230 aaPredicted RBP20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 ALDH1L2Q3SY69 923 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 AS3MTQ9HBK9 375 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 HDAC5Q9UQL6 1122 aa20.75■□□□□ 0.91
CHCHD3-202ENST00000423635 PLXNB2O15031 1838 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 LDHCP07864 332 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 CYP2B6P20813 491 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 NUDT12Q9BQG2 462 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 WDR18Q9BV38 432 aa20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 HERC5Q9UII4 1024 aaKnown RBP20.74■□□□□ 0.91
CHCHD3-202ENST00000423635 PRKAR2AP13861 404 aaKnown RBP20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 TRMT44Q8IYL2 757 aaKnown RBP20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 SOCS4Q8WXH5 440 aa20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 NSUN4Q96CB9 384 aaKnown RBP20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 XAGE2Q96GT9 111 aa20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
CHCHD3-202ENST00000423635 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 E9PSI1 815 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 BACE1P56817 501 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 GSTO1P78417 241 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 GPRC5AQ8NFJ5 357 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 USP6NLQ92738 828 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
CHCHD3-202ENST00000423635 POTEB2H3BUK9 544 aa20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 CACNB2Q08289 660 aaPredicted RBP20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 MVPQ14764 893 aaKnown RBP20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 LHX8Q68G74 356 aa20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 FAM109BQ6ICB4 259 aaPredicted RBP20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 TXNRD2Q9NNW7 524 aa20.71■□□□□ 0.91
CHCHD3-202ENST00000423635 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
CHCHD3-202ENST00000423635 COL25A1Q9BXS0 654 aaPredicted RBP20.7■□□□□ 0.9
CHCHD3-202ENST00000423635 HMG20BQ9P0W2 317 aa20.7■□□□□ 0.9
CHCHD3-202ENST00000423635 PI4KBQ9UBF8 816 aa20.7■□□□□ 0.9
CHCHD3-202ENST00000423635 RBPJLQ9UBG7 517 aa20.7■□□□□ 0.9
CHCHD3-202ENST00000423635 C19orf81C9J6K1 198 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 MAPK4P31152 587 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 HERVK_113P62684 666 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 MTMR2Q13614 643 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 LRRC26Q2I0M4 334 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 Q3C1V9 767 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 DHX36Q9H2U1 1008 aaKnown RBP20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
CHCHD3-202ENST00000423635 ASNSP08243 561 aa20.68■□□□□ 0.9
CHCHD3-202ENST00000423635 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
CHCHD3-202ENST00000423635 TFCP2Q12800 502 aa20.68■□□□□ 0.9
CHCHD3-202ENST00000423635 SPATA5Q8NB90 893 aa20.68■□□□□ 0.9
CHCHD3-202ENST00000423635 ATAD5Q96QE3 1844 aa20.68■□□□□ 0.9
CHCHD3-202ENST00000423635 PEX10O60683 326 aa20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 ZKSCAN1P17029 563 aaPredicted RBP20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 PDE3AQ14432 1141 aa20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 MORN1Q5T089 497 aa20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 METTL16Q86W50 562 aaKnown RBP20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 TEX11Q8IYF3 940 aa20.67■□□□□ 0.9
CHCHD3-202ENST00000423635 SMC4Q9NTJ3 1288 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms