RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 MAP3K10Q02779 954 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 GABPAQ06546 454 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 PPARAQ07869 468 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 C8orf34Q49A92 452 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 DCAF15Q66K64 600 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 KIAA1211Q6ZU35 1233 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 SLC44A5Q8NCS7 719 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 MAP4K1Q92918 833 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 HOOK2Q96ED9 719 aa14.43□□□□□ -0.1
LINC00539-202ENST00000423575 GBA2Q9HCG7 927 aaPredicted RBP14.43□□□□□ -0.1
LINC00539-202ENST00000423575 TBC1D12O60347 775 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 USP2O75604 605 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 HAND2P61296 217 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 FOXP4Q8IVH2 680 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 ZNF341Q9BYN7 854 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 HERC5Q9UII4 1024 aaKnown RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-202ENST00000423575 MYH1P12882 1939 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 PAPPA2Q9BXP8 1791 aa14.42□□□□□ -0.1
LINC00539-202ENST00000423575 PHF20L1A8MW92 1017 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 PPP1R12BO60237 982 aaPredicted RBP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 SHMT1P34896 483 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 FKBP1BP68106 108 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 CTDSPL2Q05D32 466 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 TTLL12Q14166 644 aaPredicted RBP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 RRP1BQ14684 758 aaKnown RBP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 C16orf86Q6ZW13 317 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 TBC1D10CQ8IV04 446 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 STK11IPQ8N1F8 1099 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 CTNNA3Q9UI47 895 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 ANAPC4Q9UJX5 808 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 ANGEL1Q9UNK9 670 aaKnown RBP14.41□□□□□ -0.1
LINC00539-202ENST00000423575 TACC3Q9Y6A5 838 aa14.41□□□□□ -0.1
LINC00539-202ENST00000423575 LAMB1P07942 1786 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 REC8O95072 547 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 INPP5BP32019 993 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 IREB2P48200 963 aaKnown RBP14.4□□□□□ -0.1
LINC00539-202ENST00000423575 CDK8P49336 464 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 MAP3K11Q16584 847 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 ARMC9Q7Z3E5 817 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
LINC00539-202ENST00000423575 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 APLP1P51693 650 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
LINC00539-202ENST00000423575 SHROOM1Q2M3G4 852 aaPredicted RBP14.39□□□□□ -0.11
LINC00539-202ENST00000423575 LDLRAD1Q5T700 205 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 TATDN1Q6P1N9 297 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.39□□□□□ -0.11
LINC00539-202ENST00000423575 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 INCENPQ9NQS7 918 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00539-202ENST00000423575 TAF6LQ9Y6J9 622 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 TRPM7Q96QT4 1865 aa14.39□□□□□ -0.11
LINC00539-202ENST00000423575 ZNF213O14771 459 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 PRDM1O75626 825 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 SEC24BO95487 1268 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 CYP21A2P08686 494 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 RASA1P20936 1047 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 C1QTNF8P60827 252 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 JAG1P78504 1218 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 MAP3K9P80192 1104 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 VGLL4Q14135 290 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 ZKSCAN4Q969J2 545 aaPredicted RBP14.38□□□□□ -0.11
LINC00539-202ENST00000423575 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 NEDD4P46934 1319 aa14.38□□□□□ -0.11
LINC00539-202ENST00000423575 LAMA4Q16363 1823 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 SLC27A2O14975 620 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 GDF11O95390 407 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 SLC3A2P08195 630 aaKnown RBP14.37□□□□□ -0.11
LINC00539-202ENST00000423575 HUNKP57058 714 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 NOL9Q5SY16 702 aaKnown RBP14.37□□□□□ -0.11
LINC00539-202ENST00000423575 AKNAD1Q5T1N1 836 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 CREB3L3Q68CJ9 461 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 SAPCD2Q86UD0 394 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 SNCAIPQ9Y6H5 919 aa14.37□□□□□ -0.11
LINC00539-202ENST00000423575 OTOFQ9HC10 1997 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 ORC4O43929 436 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
LINC00539-202ENST00000423575 FGRP09769 529 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 AKR1B1P15121 316 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 CAP2P40123 477 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 PDE4BQ07343 736 aa14.36□□□□□ -0.11
LINC00539-202ENST00000423575 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
LINC00539-202ENST00000423575 STOX1Q6ZVD7 989 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms