RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 EHD4Q9H223 541 aa18.9■□□□□ 0.62
ABCA1-203ENST00000423487 DDX60LQ5H9U9 1706 aaKnown RBP18.89■□□□□ 0.61
ABCA1-203ENST00000423487 HMGB1P09429 215 aaKnown RBP18.89■□□□□ 0.61
ABCA1-203ENST00000423487 FGRP09769 529 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 SH3BP5LQ7L8J4 393 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 FOXP4Q8IVH2 680 aaPredicted RBP18.89■□□□□ 0.61
ABCA1-203ENST00000423487 IL27Q8NEV9 243 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
ABCA1-203ENST00000423487 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 KRT23Q9C075 422 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 TOMM22Q9NS69 142 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 SERPINB13Q9UIV8 391 aa18.89■□□□□ 0.61
ABCA1-203ENST00000423487 SMIM22K7EJ46 135 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 CASTP20810 708 aaKnown RBP18.88■□□□□ 0.61
ABCA1-203ENST00000423487 NT5C2P49902 561 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 EVX2Q03828 476 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 C16orf86Q6ZW13 317 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 DYNLL2Q96FJ2 89 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 TMEM39BQ9GZU3 492 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 DEFB129Q9H1M3 183 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 ZSWIM6Q9HCJ5 1215 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 PPP2R3BQ9Y5P8 575 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 LAMA4Q16363 1823 aa18.88■□□□□ 0.61
ABCA1-203ENST00000423487 MYH1P12882 1939 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 ORC4O43929 436 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 EAPPQ56P03 285 aaPredicted RBP18.87■□□□□ 0.61
ABCA1-203ENST00000423487 CRACR2BQ8N4Y2 399 aaPredicted RBP18.87■□□□□ 0.61
ABCA1-203ENST00000423487 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 RRAGCQ9HB90 399 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 MKNK2Q9HBH9 465 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 SWAP70Q9UH65 585 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 PGAP2Q9UHJ9 254 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
ABCA1-203ENST00000423487 CYP46A1Q9Y6A2 500 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 NEDD4P46934 1319 aa18.87■□□□□ 0.61
ABCA1-203ENST00000423487 LAMB1P07942 1786 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 CDK8P49336 464 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 GABPAQ06546 454 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 RRP12Q5JTH9 1297 aaKnown RBP18.86■□□□□ 0.61
ABCA1-203ENST00000423487 RUFY3Q7L099 469 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 ESR2Q92731 530 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 UPF3BQ9BZI7 483 aaKnown RBP18.86■□□□□ 0.61
ABCA1-203ENST00000423487 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 TACC3Q9Y6A5 838 aa18.86■□□□□ 0.61
ABCA1-203ENST00000423487 METTL16Q86W50 562 aaKnown RBP18.85■□□□□ 0.61
ABCA1-203ENST00000423487 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
ABCA1-203ENST00000423487 HERC5Q9UII4 1024 aaKnown RBP18.85■□□□□ 0.61
ABCA1-203ENST00000423487 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
ABCA1-203ENST00000423487 B4E1Z4 1266 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 PRDM1O75626 825 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 NEK4P51957 841 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 DHX32Q7L7V1 743 aaKnown RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 MB21D2Q8IYB1 491 aaPredicted RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 ZNF444Q8N0Y2 327 aaPredicted RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 HOOK2Q96ED9 719 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 TEPSINQ96N21 525 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 TBC1D12O60347 775 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 RANBP6O60518 1105 aaKnown RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 KDM4AO75164 1064 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 MCM5P33992 734 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 SLC44A5Q8NCS7 719 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 ZNF526Q8TF50 670 aaPredicted RBP18.84■□□□□ 0.61
ABCA1-203ENST00000423487 CLEC11AQ9Y240 323 aa18.84■□□□□ 0.61
ABCA1-203ENST00000423487 ST18O60284 1047 aa18.83■□□□□ 0.6
ABCA1-203ENST00000423487 KRT26Q7Z3Y9 468 aa18.83■□□□□ 0.6
ABCA1-203ENST00000423487 NMRK2Q9NPI5 230 aa18.83■□□□□ 0.6
ABCA1-203ENST00000423487 WDR19Q8NEZ3 1342 aa18.83■□□□□ 0.6
ABCA1-203ENST00000423487 CPA1P15085 419 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 RASA1P20936 1047 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 EXOSC10Q01780 885 aaKnown RBP18.82■□□□□ 0.6
ABCA1-203ENST00000423487 CDAN1Q8IWY9 1227 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 DNAJC18Q9H819 358 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.82■□□□□ 0.66e-7■■■□□ 17.7
ABCA1-203ENST00000423487 PDRG1Q9NUG6 133 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
ABCA1-203ENST00000423487 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 PRC1O43663 620 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 SHMT1P34896 483 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 TATDN1Q6P1N9 297 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 CDC37L1Q7L3B6 337 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 CCDC17Q96LX7 622 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 MTA3Q9BTC8 594 aa18.81■□□□□ 0.6
ABCA1-203ENST00000423487 ANP32AP39687 249 aaKnown RBP18.8■□□□□ 0.6
ABCA1-203ENST00000423487 TFAP4Q01664 338 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 MAP3K10Q02779 954 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
ABCA1-203ENST00000423487 NBPF12Q5TAG4 269 aaPredicted RBP18.8■□□□□ 0.6
ABCA1-203ENST00000423487 DCAF15Q66K64 600 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 LDHDQ86WU2 507 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 IQCA1Q86XH1 822 aa18.8■□□□□ 0.6
ABCA1-203ENST00000423487 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
ABCA1-203ENST00000423487 FAM196BA6NMK8 535 aa18.79■□□□□ 0.6
ABCA1-203ENST00000423487 ADM5C9JUS6 153 aa18.79■□□□□ 0.6
ABCA1-203ENST00000423487 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms