RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
SREBF1-206ENST00000423161 BCRP11274 1271 aa22.67■■□□□ 1.22
SREBF1-206ENST00000423161 OSBPP22059 807 aa22.67■■□□□ 1.22
SREBF1-206ENST00000423161 HOXD10P28358 340 aa22.67■■□□□ 1.22
SREBF1-206ENST00000423161 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-206ENST00000423161 NOP58Q9Y2X3 529 aaKnown RBP22.67■■□□□ 1.22
SREBF1-206ENST00000423161 ZBED9Q6R2W3 1325 aa22.66■■□□□ 1.22
SREBF1-206ENST00000423161 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.221e-7■□□□□ 8.1
SREBF1-206ENST00000423161 SLC45A1Q9Y2W3 748 aa22.66■■□□□ 1.22
SREBF1-206ENST00000423161 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
SREBF1-206ENST00000423161 BAG3O95817 575 aa22.65■■□□□ 1.22
SREBF1-206ENST00000423161 CYP2E1P05181 493 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-206ENST00000423161 RAET1EQ8TD07 263 aa22.65■■□□□ 1.22
SREBF1-206ENST00000423161 ZNF512BQ96KM6 892 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-206ENST00000423161 DBNLQ9UJU6 430 aaKnown RBP22.65■■□□□ 1.22
SREBF1-206ENST00000423161 DOCK3Q8IZD9 2030 aa22.65■■□□□ 1.22
SREBF1-206ENST00000423161 MYH1P12882 1939 aa22.65■■□□□ 1.22
SREBF1-206ENST00000423161 PLCG2P16885 1265 aa22.64■■□□□ 1.21
SREBF1-206ENST00000423161 ZAP70P43403 619 aa22.64■■□□□ 1.21
SREBF1-206ENST00000423161 TLR7Q9NYK1 1049 aaKnown RBP22.64■■□□□ 1.21
SREBF1-206ENST00000423161 FCGRTP55899 365 aa22.63■■□□□ 1.21
SREBF1-206ENST00000423161 SMCR8Q8TEV9 937 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-206ENST00000423161 CCDC8Q9H0W5 538 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-206ENST00000423161 HERC5Q9UII4 1024 aaKnown RBP22.63■■□□□ 1.21
SREBF1-206ENST00000423161 AGTPBP1Q9UPW5 1226 aa22.63■■□□□ 1.21
SREBF1-206ENST00000423161 GRK4P32298 578 aa22.62■■□□□ 1.21
SREBF1-206ENST00000423161 CAP2P40123 477 aa22.62■■□□□ 1.21
SREBF1-206ENST00000423161 PPP4CP60510 307 aa22.62■■□□□ 1.21
SREBF1-206ENST00000423161 CEP85Q6P2H3 762 aa22.62■■□□□ 1.21
SREBF1-206ENST00000423161 ADGRA1Q86SQ6 560 aa22.62■■□□□ 1.21
SREBF1-206ENST00000423161 EAF2Q96CJ1 260 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-206ENST00000423161 DHX36Q9H2U1 1008 aaKnown RBP22.62■■□□□ 1.21
SREBF1-206ENST00000423161 PIH1D3Q9NQM4 214 aaKnown RBP22.62■■□□□ 1.21
SREBF1-206ENST00000423161 PRKCZQ05513 592 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 SPP2Q13103 211 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 TGFBRAP1Q8WUH2 860 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 TBC1D2Q9BYX2 928 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 PI4KBQ9UBF8 816 aa22.61■■□□□ 1.21
SREBF1-206ENST00000423161 FLT1P17948 1338 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 IGSF3O75054 1194 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 RRP1BQ14684 758 aaKnown RBP22.6■■□□□ 1.21
SREBF1-206ENST00000423161 MTFR1Q15390 333 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 TREML2Q5T2D2 321 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 PROCA1Q8NCQ7 364 aaPredicted RBP22.6■■□□□ 1.21
SREBF1-206ENST00000423161 ZNF280CQ8ND82 737 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 PNMA3Q9UL41 463 aa22.6■■□□□ 1.21
SREBF1-206ENST00000423161 USP17L5A8MUK1 530 aa22.59■■□□□ 1.21
SREBF1-206ENST00000423161 BIN2Q9UBW5 565 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-206ENST00000423161 GABRQQ9UN88 632 aa22.59■■□□□ 1.21
SREBF1-206ENST00000423161 EXOC6BQ9Y2D4 811 aa22.59■■□□□ 1.21
SREBF1-206ENST00000423161 HMGCS2P54868 508 aa22.58■■□□□ 1.21
SREBF1-206ENST00000423161 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.21
SREBF1-206ENST00000423161 GCC1Q96CN9 775 aa22.58■■□□□ 1.21
SREBF1-206ENST00000423161 IDH1O75874 414 aaKnown RBP22.57■■□□□ 1.2
SREBF1-206ENST00000423161 CYP7A1P22680 504 aa22.57■■□□□ 1.2
SREBF1-206ENST00000423161 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
SREBF1-206ENST00000423161 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-206ENST00000423161 ANKRD13CQ8N6S4 541 aa22.57■■□□□ 1.2
SREBF1-206ENST00000423161 SLAIN1Q8ND83 568 aa22.57■■□□□ 1.2
SREBF1-206ENST00000423161 TRIM34Q9BYJ4 488 aa22.57■■□□□ 1.2
SREBF1-206ENST00000423161 AS3MTQ9HBK9 375 aa22.57■■□□□ 1.2
SREBF1-206ENST00000423161 TNPO2O14787 897 aaKnown RBP22.56■■□□□ 1.2
SREBF1-206ENST00000423161 UBXN2AP68543 259 aa22.56■■□□□ 1.2
SREBF1-206ENST00000423161 AACSQ86V21 672 aa22.56■■□□□ 1.2
SREBF1-206ENST00000423161 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
SREBF1-206ENST00000423161 PALD1Q9ULE6 856 aa22.56■■□□□ 1.2
SREBF1-206ENST00000423161 NDUFB9Q9Y6M9 179 aa22.56■■□□□ 1.2
SREBF1-206ENST00000423161 ASNSP08243 561 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 MS4A1P11836 297 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 CCL5P13501 91 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 FLT3LGP49771 235 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 PABPC4Q13310 644 aaKnown RBP eCLIP22.55■■□□□ 1.2
SREBF1-206ENST00000423161 FAM110CQ1W6H9 321 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 SH3D19Q5HYK7 790 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 FOXP4Q8IVH2 680 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-206ENST00000423161 SHISA4Q96DD7 197 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 SAP30BPQ9UHR5 308 aaKnown RBP22.55■■□□□ 1.2
SREBF1-206ENST00000423161 CEP290O15078 2479 aa22.55■■□□□ 1.2
SREBF1-206ENST00000423161 ADCY3O60266 1144 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 HLA-DOAP06340 250 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 METTL16Q86W50 562 aaKnown RBP22.54■■□□□ 1.2
SREBF1-206ENST00000423161 MAGEB6Q8N7X4 407 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 NKX2-3Q8TAU0 364 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 RNF208Q9H0X6 261 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 NAV1Q8NEY1 1877 aa22.54■■□□□ 1.2
SREBF1-206ENST00000423161 GDF11O95390 407 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 GCLCP48506 637 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-206ENST00000423161 MTMR2Q13614 643 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 MIGA1Q8NAN2 632 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 WDR18Q9BV38 432 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 ASCC2Q9H1I8 757 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-206ENST00000423161 ANTXR1Q9H6X2 564 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 IL1RAPL2Q9NP60 686 aa22.53■■□□□ 1.2
SREBF1-206ENST00000423161 GJB1P08034 283 aa22.52■■□□□ 1.2
SREBF1-206ENST00000423161 JAG1P78504 1218 aa22.52■■□□□ 1.2
SREBF1-206ENST00000423161 MAP3K12Q12852 859 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms