RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 IVLP07476 585 aa19■□□□□ 0.63
NPC1L1-203ENST00000423141 ZAP70P43403 619 aa19■□□□□ 0.63
NPC1L1-203ENST00000423141 TOB1P50616 345 aaPredicted RBP19■□□□□ 0.63
NPC1L1-203ENST00000423141 USP49Q70CQ1 688 aa19■□□□□ 0.63
NPC1L1-203ENST00000423141 RGS22Q8NE09 1264 aa19■□□□□ 0.63
NPC1L1-203ENST00000423141 PLBD2Q8NHP8 589 aa19■□□□□ 0.63
NPC1L1-203ENST00000423141 LRRIQ3A6PVS8 624 aaPredicted RBP18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 STX17P56962 302 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 NTRK3Q16288 839 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 NT5DC1Q5TFE4 455 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 PACS2Q86VP3 889 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 NOA1Q8NC60 698 aaKnown RBP18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 ADAMTS7Q9UKP4 1686 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 BTBD18B2RXH4 712 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 ERLIN1O75477 346 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 EIF3JO75822 258 aaKnown RBP18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 KLHL10Q6JEL2 608 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
NPC1L1-203ENST00000423141 IARSP41252 1262 aaKnown RBP18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 TRDNQ13061 729 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 LRRC31Q6UY01 552 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 APPBP2Q92624 585 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 FAM217BQ9NTX9 383 aaPredicted RBP18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 FBXO2Q9UK22 296 aaPredicted RBP18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 CTAGE9A4FU28 777 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 B4E1Z4 1266 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 CDKL5O76039 1030 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 CASP1P29466 404 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 CASP14P31944 242 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 GUCY1A2P33402 732 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 TRIM29Q14134 588 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 TTLL7Q6ZT98 887 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 PPFIBP1Q86W92 1011 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
NPC1L1-203ENST00000423141 EIF3CLB5ME19 914 aaKnown RBP18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 POTEB2H3BUK9 544 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 PHKG2P15735 406 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 PLCD1P51178 756 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 RASGRP2Q7LDG7 609 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 NOSTRINQ8IVI9 506 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 EIF3CQ99613 913 aaKnown RBP18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 SLC26A6Q9BXS9 759 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 HOOK1Q9UJC3 728 aaKnown RBP18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 ECM29Q5VYK3 1845 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 RPS6KA5O75582 802 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
NPC1L1-203ENST00000423141 MFAP3LO75121 409 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 COBLO75128 1261 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 CD44P16070 742 aaKnown RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 ATP2B1P20020 1258 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 FXR1P51114 621 aaKnown RBP eCLIP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 FAM204AQ9H8W3 233 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 CEP126Q9P2H0 1117 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 ZBTB43O43298 467 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 ACTN4O43707 911 aaKnown RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 ZFYP08048 801 aaPredicted RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NBPF14Q5TI25 921 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NCAPH2Q6IBW4 605 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NFXL1Q6ZNB6 911 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 SMYD4Q8IYR2 804 aaPredicted RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 CWC25Q9NXE8 425 aaPredicted RBP18.96■□□□□ 0.63
NPC1L1-203ENST00000423141 CTAGE15A4D2H0 777 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 CTAGE8P0CG41 777 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 PTPREP23469 700 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 PBX1P40424 430 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 CTAGE6Q86UF2 777 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 CTAGE4Q8IX94 777 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 PCDHB6Q9Y5E3 794 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 SLIT3O75094 1523 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 GYPCP04921 128 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 MAGEA9P43362 315 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 HSP90B2PQ58FF3 399 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 FAM71BQ8TC56 605 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 ADD3Q9UEY8 706 aaKnown RBP18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
NPC1L1-203ENST00000423141 CDC25AP30304 524 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 DIS3L2Q8IYB7 885 aaKnown RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 MSL3Q8N5Y2 521 aaKnown RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 NAA15Q9BXJ9 866 aaKnown RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 RNF225M0QZC1 329 aaPredicted RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 APPP05067 770 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 ERVK-24P63145 666 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 NR5A1Q13285 461 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms