RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 FAM237AA0A1B0GTK4 181 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 NUP133Q8WUM0 1156 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 PCDHB6Q9Y5E3 794 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 SLC4A4Q9Y6R1 1079 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 KIF2AO00139 706 aaPredicted RBP18.16■□□□□ 0.5
CDH1-202ENST00000422392 FANCGO15287 622 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 POLR2DO15514 142 aaKnown RBP18.16■□□□□ 0.5
CDH1-202ENST00000422392 MMP1P03956 469 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 ALX1Q15699 326 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 TRMT44Q8IYL2 757 aaKnown RBP18.16■□□□□ 0.5
CDH1-202ENST00000422392 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
CDH1-202ENST00000422392 BAZ2BQ9UIF8 2168 aaKnown RBP18.16■□□□□ 0.5
CDH1-202ENST00000422392 SLC5A1P13866 664 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 IFNAR1P17181 557 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 USP49Q70CQ1 688 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
CDH1-202ENST00000422392 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 MYH2Q9UKX2 1941 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 MROH5Q6ZUA9 1318 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 NRDCO43847 1150 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
CDH1-202ENST00000422392 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
CDH1-202ENST00000422392 FMR1Q06787 632 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDH1-202ENST00000422392 RTN1Q16799 776 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 SUSD4Q5VX71 490 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 VSTM4Q8IW00 320 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
CDH1-202ENST00000422392 L2HGDHQ9H9P8 463 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 SERTAD1Q9UHV2 236 aa18.15■□□□□ 0.5
CDH1-202ENST00000422392 WTAPQ15007 396 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 MAN1B1Q9UKM7 699 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 ARAP2Q8WZ64 1704 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 BCL9O00512 1426 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
CDH1-202ENST00000422392 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
CDH1-202ENST00000422392 hCG_1642624A0A1W2PR95 340 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 FAM205CA6NFA0 338 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 CBFA2T2O43439 604 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 POSTNQ15063 836 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 SAFBQ15424 915 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDH1-202ENST00000422392 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 ZNF446Q9NWS9 450 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 STK36Q9NRP7 1315 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 ETF1P62495 437 aaKnown RBP18.13■□□□□ 0.49
CDH1-202ENST00000422392 TRIM65Q6PJ69 517 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 ADGRA1Q86SQ6 560 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 TRIM22Q8IYM9 498 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 KRT23Q9C075 422 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
CDH1-202ENST00000422392 MORC2Q9Y6X9 1032 aaPredicted RBP18.13■□□□□ 0.49
CDH1-202ENST00000422392 MINDY4BA8MYZ0 360 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 KCNJ6P48051 423 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 WTIPA6NIX2 430 aaPredicted RBP18.12■□□□□ 0.49
CDH1-202ENST00000422392 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 CABP5Q9NP86 173 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 ST7Q9NRC1 585 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 NFE2L3Q9Y4A8 694 aa18.12■□□□□ 0.49
CDH1-202ENST00000422392 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDH1-202ENST00000422392 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
CDH1-202ENST00000422392 PTPREP23469 700 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
CDH1-202ENST00000422392 TMEM139Q8IV31 216 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 REXO1L1PQ8IX06 675 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
CDH1-202ENST00000422392 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 SART3Q15020 963 aaKnown RBP18.11■□□□□ 0.49
CDH1-202ENST00000422392 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 MED15Q96RN5 788 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 BCORQ6W2J9 1755 aa18.11■□□□□ 0.49
CDH1-202ENST00000422392 ZNF335Q9H4Z2 1342 aaPredicted RBP18.11■□□□□ 0.49
CDH1-202ENST00000422392 LRP5O75197 1615 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 ERICH2A1L162 156 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
CDH1-202ENST00000422392 CASP1P29466 404 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 WASF1Q92558 559 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 SAMSN1Q9NSI8 373 aaKnown RBP18.1■□□□□ 0.49
CDH1-202ENST00000422392 TIAM2Q8IVF5 1701 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 TAF1P21675 1872 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
CDH1-202ENST00000422392 FANCBQ8NB91 859 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 CSRNP2Q9H175 543 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 ABCF2Q9UG63 623 aa18.1■□□□□ 0.49
CDH1-202ENST00000422392 PRDM1O75626 825 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 URI1O94763 535 aaPredicted RBP18.09■□□□□ 0.49
CDH1-202ENST00000422392 DEXIO95424 95 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
CDH1-202ENST00000422392 FOXP1Q9H334 677 aaPredicted RBP18.09■□□□□ 0.49
CDH1-202ENST00000422392 COL4A1P02462 1669 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 PPARAQ07869 468 aa18.09■□□□□ 0.49
CDH1-202ENST00000422392 ARHGAP29Q52LW3 1261 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms