RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PRDM5Q9NQX1 630 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-206ENST00000420746 IFT57Q9NWB7 429 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 DDX20Q9UHI6 824 aaKnown RBP11.45□□□□□ -0.58
TRIM39-206ENST00000420746 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
TRIM39-206ENST00000420746 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 FRMPD3Q5JV73 1810 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 UTYO14607 1347 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
TRIM39-206ENST00000420746 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-206ENST00000420746 ENTPD3O75355 529 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 FRAT2O75474 233 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-206ENST00000420746 MRE11P49959 708 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 MORN1Q5T089 497 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 SLC39A5Q6ZMH5 540 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 NECAB3Q96P71 396 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-206ENST00000420746 EPHX3Q9H6B9 360 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 DOCK1Q14185 1865 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 PHIPQ8WWQ0 1821 aa11.44□□□□□ -0.58
TRIM39-206ENST00000420746 TRIM43BA6NCK2 446 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 GNAI1P63096 354 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 MFSD14CQ5VZR4 134 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 GPRC5AQ8NFJ5 357 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 TRIM43Q96BQ3 446 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-206ENST00000420746 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 AK9Q5TCS8 1911 aa11.43□□□□□ -0.58
TRIM39-206ENST00000420746 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
TRIM39-206ENST00000420746 CCL14Q16627 93 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 SH3D19Q5HYK7 790 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-206ENST00000420746 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-206ENST00000420746 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 STK31Q9BXU1 1019 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-206ENST00000420746 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 DOCK2Q92608 1830 aa11.42□□□□□ -0.58
TRIM39-206ENST00000420746 RFX7Q2KHR2 1363 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 RLFQ13129 1914 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 EPHB4P54760 987 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 LMBR1LQ6UX01 489 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 ZFPM1Q8IX07 1006 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 ZNF280CQ8ND82 737 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 PRDM12Q9H4Q4 367 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 C11orf16Q9NQ32 467 aa11.41□□□□□ -0.58
TRIM39-206ENST00000420746 KBTBD13C9JR72 458 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 KIAA0355O15063 1070 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 TBC1D12O60347 775 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-206ENST00000420746 HMGCS2P54868 508 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-206ENST00000420746 FPGSQ05932 587 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 SPP2Q13103 211 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 ADGRE1Q14246 886 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 PLEKHH3Q7Z736 793 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
TRIM39-206ENST00000420746 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
TRIM39-206ENST00000420746 CHD7Q9P2D1 2997 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 CLTBP09497 229 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 HOXC6P09630 235 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 ITGB8P26012 769 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 RGS3P49796 1198 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 SH3BP5LQ7L8J4 393 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 CCAR1Q8IX12 1150 aaKnown RBP11.39□□□□□ -0.59
TRIM39-206ENST00000420746 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 KCNH6Q9H252 994 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 TXNRD2Q9NNW7 524 aa11.39□□□□□ -0.59
TRIM39-206ENST00000420746 REV3LO60673 3130 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 ERC2O15083 957 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 IGHA2P01877 340 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 HERVK_113P62684 666 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 ERVK-24P63145 666 aa11.38□□□□□ -0.59
TRIM39-206ENST00000420746 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-206ENST00000420746 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-206ENST00000420746 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-206ENST00000420746 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
TRIM39-206ENST00000420746 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-206ENST00000420746 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
TRIM39-206ENST00000420746 CYBAP13498 195 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 RAG1P15918 1043 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 IGFBP4P22692 258 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 CNGA1P29973 690 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 TLE2Q04725 743 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms