RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 FOCADQ5VW36 1801 aa23.12■■□□□ 1.29
LPP-204ENST00000420410 IGF2BP3O00425 579 aaKnown RBP eCLIP23.11■■□□□ 1.29
LPP-204ENST00000420410 IRF6O14896 467 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 TBC1D8O95759 1140 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 GTF2A2P52657 109 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 PPIL2Q13356 520 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 SCYL3Q8IZE3 742 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
LPP-204ENST00000420410 PICK1Q9NRD5 415 aa23.11■■□□□ 1.29
LPP-204ENST00000420410 CCL15-CCL14A0A0B4J2E2 113 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
LPP-204ENST00000420410 HLA-DOAP06340 250 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 PPATQ06203 517 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 CCL15Q16663 113 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 PTPN18Q99952 460 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 TRIM34Q9BYJ4 488 aa23.1■■□□□ 1.29
LPP-204ENST00000420410 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
LPP-204ENST00000420410 PDE1AP54750 535 aa23.09■■□□□ 1.29
LPP-204ENST00000420410 CHD1LQ86WJ1 897 aa23.09■■□□□ 1.29
LPP-204ENST00000420410 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
LPP-204ENST00000420410 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.09■■□□□ 1.29
LPP-204ENST00000420410 MYH7P12883 1935 aa23.09■■□□□ 1.29
LPP-204ENST00000420410 TESPA1A2RU30 521 aaPredicted RBP23.08■■□□□ 1.29
LPP-204ENST00000420410 PTPRAP18433 802 aa23.08■■□□□ 1.29
LPP-204ENST00000420410 NUCB1Q02818 461 aa23.08■■□□□ 1.29
LPP-204ENST00000420410 SNAPC2Q13487 334 aa23.08■■□□□ 1.29
LPP-204ENST00000420410 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.29
LPP-204ENST00000420410 STAP2Q9UGK3 403 aa23.08■■□□□ 1.29
LPP-204ENST00000420410 SIPA1L1O43166 1804 aa23.08■■□□□ 1.28
LPP-204ENST00000420410 PRKAB2O43741 272 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 ALDH1A1P00352 501 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 RRP1BQ14684 758 aaKnown RBP23.07■■□□□ 1.28
LPP-204ENST00000420410 OTUD7BQ6GQQ9 843 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 CCDC84Q86UT8 332 aaPredicted RBP23.07■■□□□ 1.28
LPP-204ENST00000420410 FOXP4Q8IVH2 680 aaPredicted RBP23.07■■□□□ 1.28
LPP-204ENST00000420410 FSD1Q9BTV5 496 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 DNAJC18Q9H819 358 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 ZHX2Q9Y6X8 837 aa23.07■■□□□ 1.28
LPP-204ENST00000420410 MYH1P12882 1939 aa23.06■■□□□ 1.28
LPP-204ENST00000420410 RNF113AO15541 343 aaKnown RBP23.06■■□□□ 1.28
LPP-204ENST00000420410 POLR3DP05423 398 aaPredicted RBP23.06■■□□□ 1.28
LPP-204ENST00000420410 CETPP11597 493 aa23.06■■□□□ 1.28
LPP-204ENST00000420410 R3HDMLQ9H3Y0 253 aa23.06■■□□□ 1.28
LPP-204ENST00000420410 MCM9Q9NXL9 1143 aa23.06■■□□□ 1.28
LPP-204ENST00000420410 LAMB1P07942 1786 aa23.06■■□□□ 1.28
LPP-204ENST00000420410 ZFYP08048 801 aaPredicted RBP23.05■■□□□ 1.28
LPP-204ENST00000420410 TTC6Q86TZ1 520 aa23.05■■□□□ 1.28
LPP-204ENST00000420410 METTL16Q86W50 562 aaKnown RBP23.05■■□□□ 1.28
LPP-204ENST00000420410 APPBP2Q92624 585 aa23.05■■□□□ 1.28
LPP-204ENST00000420410 OSBP2Q969R2 916 aa23.05■■□□□ 1.28
LPP-204ENST00000420410 DCP1AQ9NPI6 582 aaPredicted RBP23.05■■□□□ 1.28
LPP-204ENST00000420410 CASP8AP2Q9UKL3 1982 aa23.05■■□□□ 1.28
LPP-204ENST00000420410 DOCK1Q14185 1865 aa23.05■■□□□ 1.28
LPP-204ENST00000420410 CAP2P40123 477 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 PLCD1P51178 756 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 TNS4Q8IZW8 715 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 SERPINB13Q9UIV8 391 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 KCNH4Q9UQ05 1017 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 SLC4A4Q9Y6R1 1079 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 NAV1Q8NEY1 1877 aa23.04■■□□□ 1.28
LPP-204ENST00000420410 CYP2D6P10635 497 aa23.03■■□□□ 1.28
LPP-204ENST00000420410 EVX2Q03828 476 aa23.03■■□□□ 1.28
LPP-204ENST00000420410 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
LPP-204ENST00000420410 AFG3L2Q9Y4W6 797 aa23.03■■□□□ 1.28
LPP-204ENST00000420410 TRIM75PA6NK02 468 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 BTBD19C9JJ37 291 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 GDF11O95390 407 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 CRHR2Q13324 411 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 SHROOM1Q2M3G4 852 aaPredicted RBP23.02■■□□□ 1.28
LPP-204ENST00000420410 STRBPQ96SI9 672 aaKnown RBP23.02■■□□□ 1.28
LPP-204ENST00000420410 EHD4Q9H223 541 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
LPP-204ENST00000420410 DDX60LQ5H9U9 1706 aaKnown RBP23.02■■□□□ 1.28
LPP-204ENST00000420410 M0R2C6 588 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 GPR25O00155 361 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 CXCL11O14625 94 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 JAG1P78504 1218 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 PLEKHM2Q8IWE5 1019 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 EVI5LQ96CN4 794 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 CFHR5Q9BXR6 569 aa23.01■■□□□ 1.27
LPP-204ENST00000420410 TAF1CQ15572 869 aaPredicted RBP23■■□□□ 1.27
LPP-204ENST00000420410 ZNF296Q8WUU4 475 aaPredicted RBP23■■□□□ 1.27
LPP-204ENST00000420410 DDRGK1Q96HY6 314 aa23■■□□□ 1.27
LPP-204ENST00000420410 SEC62Q99442 399 aaKnown RBP23■■□□□ 1.27
LPP-204ENST00000420410 USP17L5A8MUK1 530 aa22.99■■□□□ 1.27
LPP-204ENST00000420410 GPAA1O43292 621 aa22.99■■□□□ 1.27
LPP-204ENST00000420410 ASNSP08243 561 aa22.99■■□□□ 1.27
LPP-204ENST00000420410 MOGSQ13724 837 aa22.99■■□□□ 1.27
LPP-204ENST00000420410 ATAD5Q96QE3 1844 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 CYP2D7A0A087X1C5 515 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 A0A0G2JLL6 359 aaPredicted RBP22.98■■□□□ 1.27
LPP-204ENST00000420410 TRIM6-TRIM34B2RNG4 842 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 USP17L12C9JPN9 530 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 USP17L21D6R901 530 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 SPP2Q13103 211 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 TATDN1Q6P1N9 297 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 GADL1Q6ZQY3 521 aa22.98■■□□□ 1.27
LPP-204ENST00000420410 PRRT2Q7Z6L0 340 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms