RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 BMP8BP34820 402 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 TREML2Q5T2D2 321 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 COA7Q96BR5 231 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 SIL1Q9H173 461 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
TNFAIP3-202ENST00000420009 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
TNFAIP3-202ENST00000420009 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 TBC1D12O60347 775 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 HMGCRP04035 888 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 ADORA1P30542 326 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 RASGRF1Q13972 1273 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 DZIP1Q86YF9 867 aaKnown RBP12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP3-202ENST00000420009 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 BTDP43251 543 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 RHBDL3P58872 404 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 PICALMQ13492 652 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 C7orf61Q8IZ16 206 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 UNC80Q8N2C7 3258 aa12.69□□□□□ -0.38
TNFAIP3-202ENST00000420009 DOCK3Q8IZD9 2030 aa12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 GJD2Q9UKL4 321 aa12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-202ENST00000420009 RPTORQ8N122 1335 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 FAM196BA6NMK8 535 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 ANP32CO43423 234 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 TRIM32Q13049 653 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 SPP2Q13103 211 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 OSBPL5Q9H0X9 879 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 COPRSQ9NQ92 184 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 ZMYND8Q9ULU4 1186 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 PA2G4Q9UQ80 394 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
TNFAIP3-202ENST00000420009 CUL9Q8IWT3 2517 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 E9PSI1 815 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 HMGCS2P54868 508 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 MECOMQ03112 1051 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 MAP3K21Q5TCX8 1036 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 TRIB2Q92519 343 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
TNFAIP3-202ENST00000420009 PFASO15067 1338 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 MAP4K4O95819 1239 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 CAP2P40123 477 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 DEFB123Q8N688 67 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
TNFAIP3-202ENST00000420009 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 SYN1P17600 705 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 TIMM10P62072 90 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 Q7L0L9 218 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 XAGE2Q96GT9 111 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
TNFAIP3-202ENST00000420009 SIPA1L1O43166 1804 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 COL6A1P12109 1028 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 XRCC5P13010 732 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
TNFAIP3-202ENST00000420009 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms