RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ESR2Q92731 530 aa16.84■□□□□ 0.29
SHMT1P1-201ENST00000419974 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
SHMT1P1-201ENST00000419974 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
SHMT1P1-201ENST00000419974 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
SHMT1P1-201ENST00000419974 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 DDX4Q9NQI0 724 aaKnown RBP16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 TACC3Q9Y6A5 838 aa16.83■□□□□ 0.28
SHMT1P1-201ENST00000419974 NEDD4P46934 1319 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 MYO1BO43795 1136 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 RBM5P52756 815 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 RCAN1P53805 252 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 ANTXR2P58335 489 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 SGMS1Q86VZ5 419 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 TCP11L1Q9NUJ3 509 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 LAMB1P07942 1786 aa16.82■□□□□ 0.28
SHMT1P1-201ENST00000419974 WNT10BO00744 389 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 CPA1P15085 419 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 EPHX2P34913 555 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 PLCD1P51178 756 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 NFIAQ12857 509 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 CCDC178Q5BJE1 867 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 IGDCC4Q8TDY8 1250 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 FAM151AQ8WW52 585 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 KLRG1Q96E93 195 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 GPRC5DQ9NZD1 345 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 TMOD2Q9NZR1 351 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
SHMT1P1-201ENST00000419974 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 B4E1Z4 1266 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 H7C1D1 291 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 PRC1O43663 620 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 NOVP48745 357 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 Q6ZUG5 572 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 ECM29Q5VYK3 1845 aa16.8■□□□□ 0.28
SHMT1P1-201ENST00000419974 PLIN4Q96Q06 1357 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 CYP2D7A0A087X1C5 515 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 CYB5R4Q7L1T6 521 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 CWC22Q9HCG8 908 aaKnown RBP16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 PCDHAC2Q9Y5I4 1007 aa16.79■□□□□ 0.28
SHMT1P1-201ENST00000419974 NID2Q14112 1375 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 ADAMTSL1Q8N6G6 1762 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 TBC1D12O60347 775 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 KDM4AO75164 1064 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 CYP2D6P10635 497 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 DDIT3P35638 169 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 PGAP2Q9UHJ9 254 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
SHMT1P1-201ENST00000419974 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 CDK8P49336 464 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 HTRA3P83110 453 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 SEC23AQ15436 765 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 BRF1Q92994 677 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 CCDC17Q96LX7 622 aa16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
SHMT1P1-201ENST00000419974 PASKQ96RG2 1323 aa16.77■□□□□ 0.27
SHMT1P1-201ENST00000419974 BAZ2AQ9UIF9 1905 aaKnown RBP16.77■□□□□ 0.27
SHMT1P1-201ENST00000419974 CNTNAP1P78357 1384 aa16.77■□□□□ 0.27
SHMT1P1-201ENST00000419974 SMIM22K7EJ46 135 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 PFKFB2O60825 505 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 RASA1P20936 1047 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms