RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TBC1D32Q96NH3 1257 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 KCNQ5Q9NR82 932 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 PCDHGB7Q9Y5F8 929 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 FANCGO15287 622 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 LEFTY1O75610 366 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 CRKP46108 304 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 HNRNPUQ00839 825 aaKnown RBP eCLIP7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 RPL6Q02878 288 aaKnown RBP7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 PCOLCE2Q9UKZ9 415 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 CORINQ9Y5Q5 1042 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 U3KQE9 123 aa7.66□□□□□ -1.18
HMGB1P49-201ENST00000418882 GSC2O15499 205 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 MED26O95402 600 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 HOXA10P31260 410 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 GRK4P32298 578 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 SNAP47Q5SQN1 464 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZMYM1Q5SVZ6 1142 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZNF765Q7L2R6 523 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 CCDC84Q86UT8 332 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 WNT10AQ9GZT5 417 aa7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P49-201ENST00000418882 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 GREM1O60565 184 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 EIF4A3P38919 411 aaKnown RBP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 RACK1P63244 317 aaKnown RBP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 PWP1Q13610 501 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 SLBPQ14493 270 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 C9orf131Q5VYM1 1079 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 FAM196AQ6ZSG2 479 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 ZNF296Q8WUU4 475 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 PICK1Q9NRD5 415 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 METTL5Q9NRN9 209 aaKnown RBP7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 RNF112Q9ULX5 631 aa7.64□□□□□ -1.19
HMGB1P49-201ENST00000418882 SCAMP3O14828 347 aaKnown RBP7.63□□□□□ -1.19
HMGB1P49-201ENST00000418882 FAM87AP0C7U9 286 aa7.63□□□□□ -1.19
HMGB1P49-201ENST00000418882 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
HMGB1P49-201ENST00000418882 SSU72Q9NP77 194 aaKnown RBP7.63□□□□□ -1.19
HMGB1P49-201ENST00000418882 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 RBM25P49756 843 aaKnown RBP7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 ETF1P62495 437 aaKnown RBP7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 USP48Q86UV5 1035 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 SLC51AQ86UW1 340 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 RNF34Q969K3 372 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 DUSP23Q9BVJ7 150 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 UBP1Q9NZI7 540 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
HMGB1P49-201ENST00000418882 OGFOD3Q6PK18 319 aa7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 ARMCX6Q7L4S7 300 aa7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 TOP6BLQ8N6T0 577 aa7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 ACSF2Q96CM8 615 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 SUPT16HQ9Y5B9 1047 aaKnown RBP7.61□□□□□ -1.19
HMGB1P49-201ENST00000418882 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 DNAJA2O60884 412 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 SSTR4P31391 388 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 MPP2Q14168 576 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 OSBPL1AQ9BXW6 950 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 LRRC3Q9BY71 257 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 PIM2Q9P1W9 311 aa7.6□□□□□ -1.19
HMGB1P49-201ENST00000418882 SLITRK5O94991 958 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 BPNT1O95861 308 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 PGRP06401 933 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 CD97P48960 835 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 PRAMEF13Q5VWM6 474 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 CDC37L1Q7L3B6 337 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 HID1Q8IV36 788 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 BRMS1Q9HCU9 246 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
HMGB1P49-201ENST00000418882 PRR36Q9H6K5 1346 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 UPK3BL1B0FP48 263 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 UPK3BL2E5RIL1 263 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 EOMESO95936 686 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 CAP2P40123 477 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 RAD51AP2Q09MP3 1159 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 FAM181AQ8N9Y4 354 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 RIN3Q8TB24 985 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 XAGE3Q8WTP9 111 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 SPON2Q9BUD6 331 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 PRDM10Q9NQV6 1147 aa7.58□□□□□ -1.2
HMGB1P49-201ENST00000418882 ADAMTS4O75173 837 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 LRIG2O94898 1065 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 FOSL1P15407 271 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 MSMPQ1L6U9 139 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 KIAA0825Q8IV33 1275 aa7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 MRPL41Q8IXM3 137 aaKnown RBP7.57□□□□□ -1.2
HMGB1P49-201ENST00000418882 KCT2Q8NC54 265 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms