RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 ERO1AQ96HE7 468 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 DNAI1Q9UI46 699 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
HDAC9-208ENST00000417496 MYH7P12883 1935 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 IFNAR1P17181 557 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC9-208ENST00000417496 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-208ENST00000417496 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 WTAPQ15007 396 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 RTN1Q16799 776 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 SERTAD1Q9UHV2 236 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 FAM205CA6NFA0 338 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
HDAC9-208ENST00000417496 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 VSTM4Q8IW00 320 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 FBXO2Q9UK22 296 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 MAN1B1Q9UKM7 699 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 BCL9O00512 1426 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 CRACR2BQ8N4Y2 399 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-208ENST00000417496 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 KRT23Q9C075 422 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 SLIT2O94813 1529 aa16.63■□□□□ 0.25
HDAC9-208ENST00000417496 POSTNQ15063 836 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 MED15Q96RN5 788 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 KIF2AO00139 706 aaPredicted RBP16.62■□□□□ 0.25
HDAC9-208ENST00000417496 CASP1P29466 404 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
HDAC9-208ENST00000417496 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 FANCBQ8NB91 859 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 NFE2L3Q9Y4A8 694 aa16.62■□□□□ 0.25
HDAC9-208ENST00000417496 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 NRDCO43847 1150 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 PRDM1O75626 825 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 PTPREP23469 700 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 ETF1P62495 437 aaKnown RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 TRIM65Q6PJ69 517 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 NACAP1Q9BZK3 213 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 ERICH2A1L162 156 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 ZNF654Q8IZM8 581 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 CSRNP2Q9H175 543 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 ST7Q9NRC1 585 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
HDAC9-208ENST00000417496 MORC2Q9Y6X9 1032 aaPredicted RBP16.61■□□□□ 0.25
HDAC9-208ENST00000417496 EXOC5O00471 708 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 CYP7A1P22680 504 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
HDAC9-208ENST00000417496 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 ACSBG1Q96GR2 724 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 PPARAQ07869 468 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 WASF1Q92558 559 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
HDAC9-208ENST00000417496 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC9-208ENST00000417496 WNT7AO00755 349 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 GYG1P46976 350 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 EVX2Q03828 476 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 CHRNDQ07001 517 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 RILPL1Q5EBL4 403 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 RGS22Q8NE09 1264 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 GTPBP4Q9BZE4 634 aaKnown RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 A0A087X0B3 334 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 URI1O94763 535 aaPredicted RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 DEXIO95424 95 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 AFMP43652 599 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
HDAC9-208ENST00000417496 XIRP1Q702N8 1843 aaKnown RBP16.59■□□□□ 0.25
HDAC9-208ENST00000417496 TNKSO95271 1327 aa16.58■□□□□ 0.25
HDAC9-208ENST00000417496 KCNJ6P48051 423 aa16.58■□□□□ 0.25
HDAC9-208ENST00000417496 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.25
HDAC9-208ENST00000417496 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.25
HDAC9-208ENST00000417496 EPC1Q9H2F5 836 aa16.58■□□□□ 0.25
HDAC9-208ENST00000417496 RAI14Q9P0K7 980 aa16.58■□□□□ 0.25
HDAC9-208ENST00000417496 COBLO75128 1261 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms