RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 MIS18AQ9NYP9 233 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.78
SP140-204ENST00000417495 ITGB4P16144 1822 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 RFX7Q2KHR2 1363 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 SCAMP3O14828 347 aaKnown RBP10.2□□□□□ -0.78
SP140-204ENST00000417495 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 FILIP1LQ4L180 1135 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
SP140-204ENST00000417495 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 TAX1BP1Q86VP1 789 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 PHC3Q8NDX5 983 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 METTL14Q9HCE5 456 aaKnown RBP10.2□□□□□ -0.78
SP140-204ENST00000417495 TTC41PQ6P2S7 1318 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 KIF4AO95239 1232 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 SEC24BO95487 1268 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 APLP1P51693 650 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 FILIP1Q7Z7B0 1213 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 SYAP1Q96A49 352 aaPredicted RBP10.2□□□□□ -0.78
SP140-204ENST00000417495 CCDC34Q96HJ3 373 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 ELF1P32519 619 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 TRPC1P48995 793 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 PXYLP1Q8TE99 480 aa10.2□□□□□ -0.78
SP140-204ENST00000417495 HMGB1P1B2RPK0 211 aaPredicted RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 ZRSR1Q15695 479 aaKnown RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 ZFYVE27Q5T4F4 411 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 MPRIPQ6WCQ1 1025 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 CLEC17AQ6ZS10 378 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 TEKT1Q969V4 418 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 PHLPP1O60346 1717 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 CYP27B1O15528 508 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 KIF5CO60282 957 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 GSPT1P15170 499 aaKnown RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 PECAM1P16284 738 aaPredicted RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 C11orf96Q7Z7L8 435 aa10.19□□□□□ -0.78
SP140-204ENST00000417495 BAG1Q99933 345 aaPredicted RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 ZNF335Q9H4Z2 1342 aaPredicted RBP10.19□□□□□ -0.78
SP140-204ENST00000417495 IL2RBP14784 551 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 DDIT3P35638 169 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 PDE1AP54750 535 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 ARHGAP4P98171 946 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 NEDD9Q14511 834 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 NEK11Q8NG66 645 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 PSD3Q9NYI0 1048 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 TMOD4Q9NZQ9 345 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 THRAP3Q9Y2W1 955 aaKnown RBP10.18□□□□□ -0.78
SP140-204ENST00000417495 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 SPTLC1O15269 473 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 ZSCAN9O15535 394 aaPredicted RBP10.18□□□□□ -0.78
SP140-204ENST00000417495 HOXA2O43364 376 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 ZNF394Q53GI3 561 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 TMEM87AQ8NBN3 555 aa10.18□□□□□ -0.78
SP140-204ENST00000417495 METTL22Q9BUU2 404 aaPredicted RBP10.18□□□□□ -0.78
SP140-204ENST00000417495 USP17L15C9J2P7 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L13C9JLJ4 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L11C9JVI0 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L21D6R901 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L18D6R9N7 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L22D6RA61 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L17D6RBQ6 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L19D6RCP7 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L20D6RJB6 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 USP17L24Q0WX57 530 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 KCNV1Q6PIU1 500 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 BICD1Q96G01 975 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 RMDN2Q96LZ7 410 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 MAGEC2Q9UBF1 373 aaPredicted RBP10.17□□□□□ -0.78
SP140-204ENST00000417495 SMTNL1A8MU46 457 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 PRMT3O60678 531 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 CORO7P57737 925 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
SP140-204ENST00000417495 TMED1Q13445 227 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 ELOAQ14241 798 aaKnown RBP10.17□□□□□ -0.78
SP140-204ENST00000417495 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
SP140-204ENST00000417495 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 F6X3S4 739 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 RABL6Q3YEC7 729 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 YIPF2Q9BWQ6 316 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms