RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 CETPP11597 493 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 PPIL2Q13356 520 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 CHD1LQ86WJ1 897 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 AMOTL1Q8IY63 956 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 SDR42E1Q8WUS8 393 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
TM9SF4-203ENST00000417389 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 IRF6O14896 467 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 RNF113AO15541 343 aaKnown RBP13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 TBC1D12O60347 775 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 CHGBP05060 677 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 PDE1AP54750 535 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 PPATQ06203 517 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 TNS4Q8IZW8 715 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
TM9SF4-203ENST00000417389 COL2A1P02458 1487 aaPredicted RBP13.3□□□□□ -0.28
TM9SF4-203ENST00000417389 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
TM9SF4-203ENST00000417389 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
TM9SF4-203ENST00000417389 NUCB1Q02818 461 aa13.3□□□□□ -0.28
TM9SF4-203ENST00000417389 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
TM9SF4-203ENST00000417389 IGF2BP3O00425 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 PRKAB2O43741 272 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 GDF11O95390 407 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 APPP05067 770 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 PTPRAP18433 802 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 GADL1Q6ZQY3 521 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 CCDC84Q86UT8 332 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 BRI3BPQ8WY22 251 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 APPBP2Q92624 585 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 SERPINB13Q9UIV8 391 aa13.29□□□□□ -0.28
TM9SF4-203ENST00000417389 NEFLP07196 543 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 CAP2P40123 477 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 MAP3K10Q02779 954 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 ATP8A2Q9NTI2 1148 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
TM9SF4-203ENST00000417389 MPHOSPH10O00566 681 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 PLCD1P51178 756 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 PTPN18Q99952 460 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 AS3MTQ9HBK9 375 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 ZFYVE28Q9HCC9 887 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 CABP5Q9NP86 173 aa13.27□□□□□ -0.29
TM9SF4-203ENST00000417389 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 USP17L5A8MUK1 530 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 GPR25O00155 361 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 CXCL11O14625 94 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 GPAA1O43292 621 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 ASNSP08243 561 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 CYP2D6P10635 497 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 TDO2P48775 406 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 SPP2Q13103 211 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 CRHR2Q13324 411 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 EHD4Q9H223 541 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
TM9SF4-203ENST00000417389 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 USP17L21D6R901 530 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 M0R2C6 588 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 PDHXO00330 501 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 FKTNO75072 461 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 GH2P01242 217 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 GNAT2P19087 354 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 DGKZQ13574 1117 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 ABCB5Q2M3G0 1257 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 ZNF280CQ8ND82 737 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 FEZ1Q99689 392 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 NACAP1Q9BZK3 213 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms