RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 GPAA1O43292 621 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 PPATQ06203 517 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 PRKG1Q13976 671 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 AMOTL1Q8IY63 956 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 ARMT1Q9H993 441 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 ARPP21Q9UBL0 812 aaPredicted RBP23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 SERPINB13Q9UIV8 391 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 MANSC4A6NHS7 340 aaPredicted RBP23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 MFAP1P55081 439 aaKnown RBP23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 SBK1Q52WX2 424 aa23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 PAXIP1Q6ZW49 1069 aaPredicted RBP23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 MIGA2Q7L4E1 593 aa23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 PALD1Q9ULE6 856 aa23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 SIPA1L1O43166 1804 aa23.19■■□□□ 1.3
SLC39A1-206ENST00000417348 PATL2C9JE40 543 aaKnown RBP23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 TM4SF4P48230 202 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 SREBF2Q12772 1141 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 TATDN1Q6P1N9 297 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 SCYL3Q8IZE3 742 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 WNK4Q96J92 1243 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 NACAP1Q9BZK3 213 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 SNCAIPQ9Y6H5 919 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 SLC4A4Q9Y6R1 1079 aa23.18■■□□□ 1.3
SLC39A1-206ENST00000417348 TESPA1A2RU30 521 aaPredicted RBP23.17■■□□□ 1.3
SLC39A1-206ENST00000417348 GABPAQ06546 454 aa23.17■■□□□ 1.3
SLC39A1-206ENST00000417348 PPIL2Q13356 520 aa23.17■■□□□ 1.3
SLC39A1-206ENST00000417348 MCMDC2Q4G0Z9 681 aa23.17■■□□□ 1.3
SLC39A1-206ENST00000417348 MCM9Q9NXL9 1143 aa23.17■■□□□ 1.3
SLC39A1-206ENST00000417348 ZMYM6O95789 1325 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 SDSP20132 328 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 CAP2P40123 477 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 CRACR2BQ8N4Y2 399 aaPredicted RBP23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 SDR42E1Q8WUS8 393 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 RILPL2Q969X0 211 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 CLMNQ96JQ2 1002 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 TRIM34Q9BYJ4 488 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 ZCCHC17Q9NP64 241 aaKnown RBP23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 WBP1LQ9NX94 342 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 SAGE1Q9NXZ1 904 aa23.16■■□□□ 1.3
SLC39A1-206ENST00000417348 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 GSG1L2A8MUP6 293 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 POLR3DP05423 398 aaPredicted RBP23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 ASNSP08243 561 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 C12orf60Q5U649 245 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 CFHR5Q9BXR6 569 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 PICK1Q9NRD5 415 aa23.15■■□□□ 1.3
SLC39A1-206ENST00000417348 CXCL11O14625 94 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 ALDH1A1P00352 501 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 CHGBP05060 677 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 GSPT1P15170 499 aaKnown RBP23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 INPP5BP32019 993 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 GTF2A2P52657 109 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 KIF23Q02241 960 aaPredicted RBP23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 ALX1Q15699 326 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 SLFNL1Q499Z3 407 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 ZKSCAN4Q969J2 545 aaPredicted RBP23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 DNAJC18Q9H819 358 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 FZD1Q9UP38 647 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 KCNH4Q9UQ05 1017 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.29
SLC39A1-206ENST00000417348 RAD50Q92878 1312 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 M0R2C6 588 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 NT5C2P49902 561 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 BMP2KLQ5H9B9 411 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 ELP3Q9H9T3 547 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 ZNF287Q9HBT7 754 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 PCNTO95613 3336 aa23.13■■□□□ 1.29
SLC39A1-206ENST00000417348 PRKAB2O43741 272 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 PTPRAP18433 802 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 PLCD1P51178 756 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 CCDC17Q96LX7 622 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 BEGAINQ9BUH8 593 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 DIAPH3Q9NSV4 1193 aa23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 SAP30BPQ9UHR5 308 aaKnown RBP23.12■■□□□ 1.29
SLC39A1-206ENST00000417348 USP17L12C9JPN9 530 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 USP17L21D6R901 530 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 AOC2O75106 756 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 NOM1Q5C9Z4 860 aaKnown RBP23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 OTUD7BQ6GQQ9 843 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 CTR9Q6PD62 1173 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 RUFY2Q8WXA3 655 aa23.11■■□□□ 1.29
SLC39A1-206ENST00000417348 CCDC171Q6TFL3 1326 aa23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 C16orf86Q6ZW13 317 aa23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 MS4A4AQ96JQ5 239 aa23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 SEC62Q99442 399 aaKnown RBP23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 AS3MTQ9HBK9 375 aa23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
SLC39A1-206ENST00000417348 A0A0D9SFI3 127 aa23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 CETPP11597 493 aa23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 GJA5P36382 358 aa23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 NMIQ13287 307 aaPredicted RBP23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 WDR18Q9BV38 432 aa23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 AFG3L2Q9Y4W6 797 aa23.09■■□□□ 1.29
SLC39A1-206ENST00000417348 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 IRF6O14896 467 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms