RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PSMA5P28066 241 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 ADD1P35611 737 aaKnown RBP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 CCT4P50991 539 aaKnown RBP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 PIP4K2BP78356 416 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 PTH1RQ03431 593 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 TRAF1Q13077 416 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 PLCB4Q15147 1175 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 RBBP5Q15291 538 aaKnown RBP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 CEP57Q86XR8 500 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 RIN2Q8WYP3 895 aaPredicted RBP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 DPF2Q92785 391 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 BRF1Q92994 677 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 TEX13AQ9BXU3 409 aaPredicted RBP7.26□□□□□ -1.25
CCNT1-202ENST00000417344 EHD4Q9H223 541 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 IRAK4Q9NWZ3 460 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 GOLGA6AQ9NYA3 693 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 SAMM50Q9Y512 469 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 SETBP1Q9Y6X0 1596 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 A0A1W2PP64 1363 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 PREX2Q70Z35 1606 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 QRICH2Q9H0J4 1663 aa7.26□□□□□ -1.25
CCNT1-202ENST00000417344 FYB1O15117 783 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 AP1G2O75843 785 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ZNF202O95125 648 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 HMOX1P09601 288 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 EZRP15311 586 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 IBSPP21815 317 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ARID4AP29374 1257 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 GGCXP38435 758 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CDR1P51861 262 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 RBM5P52756 815 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 SLC8A3P57103 927 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 NLRP12P59046 1061 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 GNGT1P63211 74 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ATP8B2P98198 1209 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ACTN3Q08043 901 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 STIM1Q13586 685 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 NAA25Q14CX7 972 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 NECTIN1Q15223 517 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CCDC40Q4G0X9 1142 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 TLDC1Q6P9B6 456 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 SLC4A10Q6U841 1118 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 YTHDF3Q7Z739 585 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 RUFY2Q8WXA3 655 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 IRX2Q9BZI1 471 aaPredicted RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 HSD3B7Q9H2F3 369 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 RABEP2Q9H5N1 569 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 VCPKMTQ9H867 229 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 KIF9Q9HAQ2 790 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ATP6V0A4Q9HBG4 840 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 IL1RAPL2Q9NP60 686 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 POLR3EQ9NVU0 708 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ZC3H4Q9UPT8 1303 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ANKRD18BA2A2Z9 1011 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 KIF5CO60282 957 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 JAK2O60674 1132 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 PFKFB2O60825 505 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 SNUPNO95149 360 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CCDC175P0C221 793 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 FDX1P10109 184 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MCM3P25205 808 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ME1P48163 572 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 SNCBQ16143 134 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 WHAMMP3Q1A5X7 153 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 RCSD1Q6JBY9 416 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MICALCLQ6ZW33 695 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CCDC50Q8IVM0 306 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MAGEC3Q8TD91 643 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 COG1Q8WTW3 980 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MRPS27Q92552 414 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 THOC1Q96FV9 657 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 PAIP2Q9BPZ3 127 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CRACR2AQ9BSW2 395 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 DESI2Q9BSY9 194 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 FTOQ9C0B1 505 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 CENPHQ9H3R5 247 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 MRPL44Q9H9J2 332 aaKnown RBP7.25□□□□□ -1.25
CCNT1-202ENST00000417344 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
CCNT1-202ENST00000417344 ZFYVE9O95405 1425 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 CTAGE9A4FU28 777 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 A6NNZ2 444 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 TMEM232C9JQI7 657 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 BIN1O00499 593 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 NDUFAB1O14561 156 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 SKAP2O75563 359 aaPredicted RBP7.24□□□□□ -1.25
CCNT1-202ENST00000417344 PECAM1P16284 738 aaPredicted RBP7.24□□□□□ -1.25
CCNT1-202ENST00000417344 AMPHP49418 695 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 RPS6KA3P51812 740 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 STK3Q13188 491 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 TBX2Q13207 712 aaPredicted RBP7.24□□□□□ -1.25
CCNT1-202ENST00000417344 Q3C1V9 767 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 TUBB8Q3ZCM7 444 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 CREB3L3Q68CJ9 461 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 ATL3Q6DD88 541 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 BLOC1S2Q6QNY1 142 aa7.24□□□□□ -1.25
CCNT1-202ENST00000417344 KIAA1328Q86T90 577 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms