RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 SHHQ15465 462 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 C9orf50Q5SZB4 431 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 USP38Q8NB14 1042 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 SOCS4Q8WXH5 440 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 SUCLG2Q96I99 432 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 IDI2Q9BXS1 227 aa11.01□□□□□ -0.65
SMIM12-201ENST00000417239 ASCC2Q9H1I8 757 aaPredicted RBP11.01□□□□□ -0.65
SMIM12-201ENST00000417239 FOCADQ5VW36 1801 aa11□□□□□ -0.65
SMIM12-201ENST00000417239 DDTLA6NHG4 134 aaPredicted RBP11□□□□□ -0.65
SMIM12-201ENST00000417239 ZKSCAN1P17029 563 aaPredicted RBP11□□□□□ -0.65
SMIM12-201ENST00000417239 FGFR2P21802 821 aa11□□□□□ -0.65
SMIM12-201ENST00000417239 TRMT44Q8IYL2 757 aaKnown RBP11□□□□□ -0.65
SMIM12-201ENST00000417239 FAM122AQ96E09 287 aa11□□□□□ -0.65
SMIM12-201ENST00000417239 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
SMIM12-201ENST00000417239 CHD7Q9P2D1 2997 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 TMEM265A0A087WTH1 108 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 HMGCS2P54868 508 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 PABPC4Q13310 644 aaKnown RBP eCLIP10.99□□□□□ -0.655e-9■□□□□ 9.2
SMIM12-201ENST00000417239 PUM3Q15397 648 aaKnown RBP10.99□□□□□ -0.65
SMIM12-201ENST00000417239 CCL14Q16627 93 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
SMIM12-201ENST00000417239 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
SMIM12-201ENST00000417239 USP6NLQ92738 828 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
SMIM12-201ENST00000417239 SENP6Q9GZR1 1112 aaPredicted RBP10.99□□□□□ -0.65
SMIM12-201ENST00000417239 NCOR1O75376 2440 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 GBF1Q92538 1859 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 PLXNA1Q9UIW2 1896 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 TRANK1O15050 2925 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 PEX10O60683 326 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 LDHBP07195 334 aaKnown RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 IFIT1P09914 478 aaKnown RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 SPP2Q13103 211 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 ZNF280CQ8ND82 737 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 BICC1Q9H694 974 aaKnown RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 TXNRD2Q9NNW7 524 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
SMIM12-201ENST00000417239 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 GAKO14976 1311 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 SALL1Q9NSC2 1324 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
SMIM12-201ENST00000417239 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 VAMP4O75379 141 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 NBPF7P0C2Y1 421 aaPredicted RBP10.97□□□□□ -0.65
SMIM12-201ENST00000417239 RTP1P59025 263 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 MAP3K12Q12852 859 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 APBA2Q99767 749 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 UTYO14607 1347 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
SMIM12-201ENST00000417239 IL16Q14005 1332 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 DNM1LO00429 736 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 TBC1D12O60347 775 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 RGS2P41220 211 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 PICALMQ13492 652 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 PDE3AQ14432 1141 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 MORN1Q5T089 497 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 WWC1Q8IX03 1113 aa10.96□□□□□ -0.65
SMIM12-201ENST00000417239 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.65
SMIM12-201ENST00000417239 TCF20Q9UGU0 1960 aaKnown RBP10.96□□□□□ -0.66
SMIM12-201ENST00000417239 SLC5A1P13866 664 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 MAPK4P31152 587 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 HERVK_113P62684 666 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
SMIM12-201ENST00000417239 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 GPR142Q7Z601 462 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 GPRC5AQ8NFJ5 357 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 LPIN2Q92539 896 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 LPAR1Q92633 364 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 BADQ92934 168 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 P2RX7Q99572 595 aaKnown RBP10.95□□□□□ -0.66
SMIM12-201ENST00000417239 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 PORCNQ9H237 461 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 DDX20Q9UHI6 824 aaKnown RBP10.95□□□□□ -0.66
SMIM12-201ENST00000417239 ATP11BQ9Y2G3 1177 aa10.95□□□□□ -0.66
SMIM12-201ENST00000417239 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 HOXA7P31268 230 aaPredicted RBP10.94□□□□□ -0.66
SMIM12-201ENST00000417239 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 ERVK-24P63145 666 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
SMIM12-201ENST00000417239 SNX17Q15036 470 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 ADAMTS19Q8TE59 1207 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 ATXN2LQ8WWM7 1075 aaKnown RBP10.94□□□□□ -0.66
SMIM12-201ENST00000417239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMIM12-201ENST00000417239 PRDM5Q9NQX1 630 aaPredicted RBP10.94□□□□□ -0.66
SMIM12-201ENST00000417239 PDLIM7Q9NR12 457 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
SMIM12-201ENST00000417239 SYNGAP1Q96PV0 1343 aa10.93□□□□□ -0.66
SMIM12-201ENST00000417239 MSCO60682 206 aa10.93□□□□□ -0.66
SMIM12-201ENST00000417239 CAP2P40123 477 aa10.93□□□□□ -0.66
SMIM12-201ENST00000417239 BTDP43251 543 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms