RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 IL1RAPL2Q9NP60 686 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
UBXN4-203ENST00000416538 ANKRD23Q86SG2 305 aa18.51■□□□□ 0.55
UBXN4-203ENST00000416538 AACSQ86V21 672 aa18.51■□□□□ 0.55
UBXN4-203ENST00000416538 DNAJC18Q9H819 358 aa18.51■□□□□ 0.55
UBXN4-203ENST00000416538 EFCC1Q9HA90 598 aa18.51■□□□□ 0.55
UBXN4-203ENST00000416538 PDHXO00330 501 aa18.5■□□□□ 0.55
UBXN4-203ENST00000416538 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
UBXN4-203ENST00000416538 AFG3L2Q9Y4W6 797 aa18.5■□□□□ 0.55
UBXN4-203ENST00000416538 ZHX2Q9Y6X8 837 aa18.5■□□□□ 0.55
UBXN4-203ENST00000416538 FLT1P17948 1338 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 A0A0G2JLL6 359 aaPredicted RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 TBC1D12O60347 775 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 LACTBP83111 547 aaPredicted RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 SHROOM1Q2M3G4 852 aaPredicted RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 C17orf99Q6UX52 265 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 PRRT2Q7Z6L0 340 aaPredicted RBP18.49■□□□□ 0.55
UBXN4-203ENST00000416538 CPA4Q9UI42 421 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 PTCH2Q9Y6C5 1203 aa18.49■□□□□ 0.55
UBXN4-203ENST00000416538 POTEFA5A3E0 1075 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 CXCL11O14625 94 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 CTNND1O60716 968 aaKnown RBP18.48■□□□□ 0.55
UBXN4-203ENST00000416538 MAP4K4O95819 1239 aaPredicted RBP18.48■□□□□ 0.55
UBXN4-203ENST00000416538 PPP4CP60510 307 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 MAPKAPK5Q8IW41 473 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 ARMC5Q96C12 935 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBXN4-203ENST00000416538 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
UBXN4-203ENST00000416538 BAZ2AQ9UIF9 1905 aaKnown RBP18.48■□□□□ 0.55
UBXN4-203ENST00000416538 MYH8P13535 1937 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 APBB1O00213 710 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 IDH1O75874 414 aaKnown RBP18.47■□□□□ 0.55
UBXN4-203ENST00000416538 CYP2C8P10632 490 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 JAG1P78504 1218 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
UBXN4-203ENST00000416538 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
UBXN4-203ENST00000416538 MS4A1P11836 297 aa18.46■□□□□ 0.55
UBXN4-203ENST00000416538 MKI67P46013 3256 aaKnown RBP18.45■□□□□ 0.54
UBXN4-203ENST00000416538 PLXNB2O15031 1838 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 BCRP11274 1271 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 CYP7A1P22680 504 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 GADL1Q6ZQY3 521 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
UBXN4-203ENST00000416538 MAGEB6Q8N7X4 407 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 MIGA1Q8NAN2 632 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 TRIM47Q96LD4 638 aa18.45■□□□□ 0.54
UBXN4-203ENST00000416538 BAG3O95817 575 aa18.44■□□□□ 0.54
UBXN4-203ENST00000416538 CAP2P40123 477 aa18.44■□□□□ 0.54
UBXN4-203ENST00000416538 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
UBXN4-203ENST00000416538 ZNF333Q96JL9 665 aa18.44■□□□□ 0.54
UBXN4-203ENST00000416538 PARK7Q99497 189 aaKnown RBP18.44■□□□□ 0.54
UBXN4-203ENST00000416538 NOL10Q9BSC4 688 aaKnown RBP18.44■□□□□ 0.54
UBXN4-203ENST00000416538 SAP30BPQ9UHR5 308 aaKnown RBP18.44■□□□□ 0.54
UBXN4-203ENST00000416538 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
UBXN4-203ENST00000416538 PLCG2P16885 1265 aa18.43■□□□□ 0.54
UBXN4-203ENST00000416538 METTL16Q86W50 562 aaKnown RBP18.43■□□□□ 0.54
UBXN4-203ENST00000416538 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
UBXN4-203ENST00000416538 EDC3Q96F86 508 aaKnown RBP18.43■□□□□ 0.54
UBXN4-203ENST00000416538 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
UBXN4-203ENST00000416538 RIOK1Q9BRS2 568 aaKnown RBP18.42■□□□□ 0.54
UBXN4-203ENST00000416538 PI4KBQ9UBF8 816 aa18.42■□□□□ 0.54
UBXN4-203ENST00000416538 HERC5Q9UII4 1024 aaKnown RBP18.42■□□□□ 0.54
UBXN4-203ENST00000416538 HMMRO75330 724 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 OSBPP22059 807 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 PSMC4P43686 418 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 EVX2Q03828 476 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 SPP2Q13103 211 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 FASTKD5Q7L8L6 764 aaKnown RBP18.41■□□□□ 0.54
UBXN4-203ENST00000416538 SH3TC2Q8TF17 1288 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
UBXN4-203ENST00000416538 AGTPBP1Q9UPW5 1226 aa18.41■□□□□ 0.54
UBXN4-203ENST00000416538 IGSF3O75054 1194 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 GDF11O95390 407 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 PDE6AP16499 860 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 HMGCS2P54868 508 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 SLFNL1Q499Z3 407 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 SLC9C1Q4G0N8 1177 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 CLASRPQ8N2M8 674 aaKnown RBP18.4■□□□□ 0.54
UBXN4-203ENST00000416538 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
UBXN4-203ENST00000416538 TCRBV5S4A2TA0A5A2 114 aa18.39■□□□□ 0.53
UBXN4-203ENST00000416538 CHGBP05060 677 aa18.39■□□□□ 0.53
UBXN4-203ENST00000416538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
UBXN4-203ENST00000416538 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
UBXN4-203ENST00000416538 SRRDQ9UH36 339 aa18.39■□□□□ 0.53
UBXN4-203ENST00000416538 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
UBXN4-203ENST00000416538 GOLIM4O00461 696 aa18.38■□□□□ 0.53
UBXN4-203ENST00000416538 SMARCA5O60264 1052 aaPredicted RBP18.38■□□□□ 0.53
UBXN4-203ENST00000416538 MYCP01106 439 aaPredicted RBP18.38■□□□□ 0.53
UBXN4-203ENST00000416538 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
UBXN4-203ENST00000416538 MAP3K12Q12852 859 aa18.38■□□□□ 0.53
UBXN4-203ENST00000416538 KIF22Q14807 665 aa18.38■□□□□ 0.53
UBXN4-203ENST00000416538 PROCA1Q8NCQ7 364 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms