RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
LINC00475-202ENST00000416438 KIF2AO00139 706 aaPredicted RBP16.93■□□□□ 0.3
LINC00475-202ENST00000416438 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
LINC00475-202ENST00000416438 IFNAR1P17181 557 aa16.93■□□□□ 0.3
LINC00475-202ENST00000416438 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
LINC00475-202ENST00000416438 UTP14CQ5TAP6 766 aaKnown RBP16.93■□□□□ 0.3
LINC00475-202ENST00000416438 SERTAD1Q9UHV2 236 aa16.93■□□□□ 0.3
LINC00475-202ENST00000416438 DNAI1Q9UI46 699 aa16.93■□□□□ 0.3
LINC00475-202ENST00000416438 MROH5Q6ZUA9 1318 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 ITGB4P16144 1822 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 RTN1Q16799 776 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
LINC00475-202ENST00000416438 ZNF34Q8IZ26 560 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.92■□□□□ 0.3
LINC00475-202ENST00000416438 NRDCO43847 1150 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 TOP1P11387 765 aaKnown RBP16.92■□□□□ 0.3
LINC00475-202ENST00000416438 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC00475-202ENST00000416438 WTAPQ15007 396 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 L2HGDHQ9H9P8 463 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 MAN1B1Q9UKM7 699 aa16.92■□□□□ 0.3
LINC00475-202ENST00000416438 FANCGO15287 622 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 FAM177A1Q8N128 213 aaPredicted RBP16.91■□□□□ 0.3
LINC00475-202ENST00000416438 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 GTPBP4Q9BZE4 634 aaKnown RBP16.91■□□□□ 0.3
LINC00475-202ENST00000416438 KRT23Q9C075 422 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
LINC00475-202ENST00000416438 BCL9O00512 1426 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00475-202ENST00000416438 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
LINC00475-202ENST00000416438 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
LINC00475-202ENST00000416438 hCG_1642624A0A1W2PR95 340 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 WTIPA6NIX2 430 aaPredicted RBP16.9■□□□□ 0.3
LINC00475-202ENST00000416438 CBFA2T2O43439 604 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 TRIM22Q8IYM9 498 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 TMX1Q9H3N1 280 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 CNNM2Q9H8M5 875 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 STK36Q9NRP7 1315 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 PTPREP23469 700 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
LINC00475-202ENST00000416438 POSTNQ15063 836 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 TRIM65Q6PJ69 517 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
LINC00475-202ENST00000416438 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
LINC00475-202ENST00000416438 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 KCNJ6P48051 423 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC00475-202ENST00000416438 SLIT2O94813 1529 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 NHSL1Q5SYE7 1610 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
LINC00475-202ENST00000416438 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 WASF1Q92558 559 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 MED15Q96RN5 788 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
LINC00475-202ENST00000416438 ERICH2A1L162 156 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
LINC00475-202ENST00000416438 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
LINC00475-202ENST00000416438 ZNF654Q8IZM8 581 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 LRP6O75581 1613 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 EXOC5O00471 708 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 SART3Q15020 963 aaKnown RBP16.88■□□□□ 0.29
LINC00475-202ENST00000416438 TMEM139Q8IV31 216 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 CSRNP2Q9H175 543 aa16.88■□□□□ 0.29
LINC00475-202ENST00000416438 SAMSN1Q9NSI8 373 aaKnown RBP16.88■□□□□ 0.29
LINC00475-202ENST00000416438 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 CASP1P29466 404 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
LINC00475-202ENST00000416438 FOXP1Q9H334 677 aaPredicted RBP16.87■□□□□ 0.29
LINC00475-202ENST00000416438 PRDM1O75626 825 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 URI1O94763 535 aaPredicted RBP16.87■□□□□ 0.29
LINC00475-202ENST00000416438 DEXIO95424 95 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 CYP7A1P22680 504 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 PPARAQ07869 468 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 SMARCE1Q969G3 411 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
LINC00475-202ENST00000416438 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
LINC00475-202ENST00000416438 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
LINC00475-202ENST00000416438 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
LINC00475-202ENST00000416438 UBAC1Q9BSL1 405 aa16.86■□□□□ 0.29
LINC00475-202ENST00000416438 ARHGAP29Q52LW3 1261 aa16.86■□□□□ 0.29
LINC00475-202ENST00000416438 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 VWA3AA6NCI4 1184 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 EIF5P55010 431 aaKnown RBP16.85■□□□□ 0.29
LINC00475-202ENST00000416438 CHRNDQ07001 517 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 MORC3Q14149 939 aa16.85■□□□□ 0.29
LINC00475-202ENST00000416438 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms