RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 TCHHQ07283 1943 aa22.26■■□□□ 1.15
PPM1N-206ENST00000415077 GOLGA8AA7E2F4 631 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 ECE2O60344 883 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 CDKL5O76039 1030 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 NCLP19338 710 aaKnown RBP22.25■■□□□ 1.15
PPM1N-206ENST00000415077 RHBDL3P58872 404 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 DNM1Q05193 864 aaKnown RBP22.25■■□□□ 1.15
PPM1N-206ENST00000415077 CPLX2Q6PUV4 134 aaKnown RBP22.25■■□□□ 1.15
PPM1N-206ENST00000415077 DPEP1P16444 411 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 DEKP35659 375 aaKnown RBP22.25■■□□□ 1.15
PPM1N-206ENST00000415077 SEC23AQ15436 765 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 AOC3Q16853 763 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 USP48Q86UV5 1035 aa22.25■■□□□ 1.15
PPM1N-206ENST00000415077 ORC3Q9UBD5 711 aaPredicted RBP22.25■■□□□ 1.15
PPM1N-206ENST00000415077 POLR3DP05423 398 aaPredicted RBP22.24■■□□□ 1.15
PPM1N-206ENST00000415077 CDC27P30260 824 aa22.24■■□□□ 1.15
PPM1N-206ENST00000415077 STRIP1Q5VSL9 837 aa22.24■■□□□ 1.15
PPM1N-206ENST00000415077 ENAHQ8N8S7 591 aaPredicted RBP22.24■■□□□ 1.15
PPM1N-206ENST00000415077 KCNA3P22001 575 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 FOSBP53539 338 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 KIAA2012Q0VF49 1180 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 SAP30BPQ9UHR5 308 aaKnown RBP22.23■■□□□ 1.15
PPM1N-206ENST00000415077 SNED1Q8TER0 1413 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 SCNN1DP51172 638 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
PPM1N-206ENST00000415077 DLEC1Q9Y238 1755 aa22.23■■□□□ 1.15
PPM1N-206ENST00000415077 FLT1P17948 1338 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 PLCD1P51178 756 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 FAM47AQ5JRC9 791 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 IFIT1BQ5T764 474 aaKnown RBP22.22■■□□□ 1.15
PPM1N-206ENST00000415077 RTKN2Q8IZC4 609 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 ZNF654Q8IZM8 581 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 TMEM87AQ8NBN3 555 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
PPM1N-206ENST00000415077 FAM217BQ9NTX9 383 aaPredicted RBP22.22■■□□□ 1.15
PPM1N-206ENST00000415077 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
PPM1N-206ENST00000415077 TSPY2A6NKD2 308 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 RCAN1P53805 252 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 HHIPL2Q6UWX4 724 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 TEKT1Q969V4 418 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 DYNLL2Q96FJ2 89 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 MKNK2Q9HBH9 465 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 NAV1Q8NEY1 1877 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 ROBO3Q96MS0 1386 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 CDK5RAP2Q96SN8 1893 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 USP17L3A6NCW0 530 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 USP17L4A6NCW7 530 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 PPIP5K2O43314 1243 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 FIBPO43427 364 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 POLD1P28340 1107 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 NT5C2P49902 561 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 FKBP1AP62942 108 aaKnown RBP22.21■■□□□ 1.15
PPM1N-206ENST00000415077 CSPP1Q1MSJ5 1256 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 USP17L1Q7RTZ2 530 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 MTFR1LQ9H019 292 aa22.21■■□□□ 1.15
PPM1N-206ENST00000415077 NID2Q14112 1375 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 CCDC196A0A1B0GTZ2 297 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 KRT85P78386 507 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 NTRK3Q16288 839 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 RTN1Q16799 776 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 DACT2Q5SW24 774 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 FAM173BQ6P4H8 233 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 NUP133Q8WUM0 1156 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 C8orf76Q96K31 380 aa22.2■■□□□ 1.14
PPM1N-206ENST00000415077 MBD3O95983 291 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
PPM1N-206ENST00000415077 GUCY1B3Q02153 619 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 RESTQ13127 1097 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 FANCBQ8NB91 859 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 PHKBQ93100 1093 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 ZNF287Q9HBT7 754 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 TGFB2P61812 414 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 CATIPQ7Z7H3 387 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 KIAA0825Q8IV33 1275 aa22.19■■□□□ 1.14
PPM1N-206ENST00000415077 NMT2O60551 498 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 TFAP4Q01664 338 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 PSMD1Q99460 953 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 USP40Q9NVE5 1235 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 SCN9AQ15858 1988 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 GADD45BO75293 160 aaPredicted RBP22.18■■□□□ 1.14
PPM1N-206ENST00000415077 CRKP46108 304 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 PPP2R5BQ15173 497 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 CAVIN1Q6NZI2 390 aaKnown RBP22.18■■□□□ 1.14
PPM1N-206ENST00000415077 ZNF444Q8N0Y2 327 aaPredicted RBP22.18■■□□□ 1.14
PPM1N-206ENST00000415077 FBXO18Q8NFZ0 1043 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 MRIQ9BWK5 157 aa22.18■■□□□ 1.14
PPM1N-206ENST00000415077 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
PPM1N-206ENST00000415077 IFNAR1P17181 557 aa22.17■■□□□ 1.14
PPM1N-206ENST00000415077 SSRP1Q08945 709 aaKnown RBP22.17■■□□□ 1.14
PPM1N-206ENST00000415077 PICALMQ13492 652 aa22.17■■□□□ 1.14
PPM1N-206ENST00000415077 R3HDM1Q15032 1099 aaKnown RBP22.17■■□□□ 1.14
PPM1N-206ENST00000415077 APOBEC3HQ6NTF7 200 aaKnown RBP22.17■■□□□ 1.14
PPM1N-206ENST00000415077 PIM2Q9P1W9 311 aa22.17■■□□□ 1.14
PPM1N-206ENST00000415077 SLC44A5Q8NCS7 719 aa22.16■■□□□ 1.14
PPM1N-206ENST00000415077 ZDHHC15Q96MV8 337 aa22.16■■□□□ 1.14
PPM1N-206ENST00000415077 ALG1Q9BT22 464 aa22.16■■□□□ 1.14
PPM1N-206ENST00000415077 WDHD1O75717 1129 aaPredicted RBP22.16■■□□□ 1.14
PPM1N-206ENST00000415077 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms