RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 ERICH2A1L162 156 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 LIFRP42702 1097 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 WTAPQ15007 396 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 SMARCC2Q8TAQ2 1214 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 COL4A5P29400 1685 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 RAD17O75943 681 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLGN-202ENST00000414773 PDE4BQ07343 736 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 APOBEC3HQ6NTF7 200 aaKnown RBP12.85□□□□□ -0.35
CLGN-202ENST00000414773 SGMS1Q86VZ5 419 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 TNKSO95271 1327 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 ORC4O43929 436 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
CLGN-202ENST00000414773 CDC42EP5Q6NZY7 148 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 SLC12A7Q9Y666 1083 aa12.85□□□□□ -0.35
CLGN-202ENST00000414773 METAP2P50579 478 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLGN-202ENST00000414773 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 ZBTB43O43298 467 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 WDHD1O75717 1129 aaPredicted RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 CPLX1O14810 134 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 NMT2O60551 498 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 PDCP20941 246 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 FOSBP53539 338 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 SEC23AQ15436 765 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 ENAHQ8N8S7 591 aaPredicted RBP12.84□□□□□ -0.35
CLGN-202ENST00000414773 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
CLGN-202ENST00000414773 ROBO3Q96MS0 1386 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 PSMD14O00487 310 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 DHX16O60231 1041 aaKnown RBP12.83□□□□□ -0.36
CLGN-202ENST00000414773 CDC27P30260 824 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 MTA3Q9BTC8 594 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 F13A1P00488 732 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 CACNB3P54284 484 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
CLGN-202ENST00000414773 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
CLGN-202ENST00000414773 MYH1P12882 1939 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 NFKBIEO00221 500 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 TFAP4Q01664 338 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 NFIAQ12857 509 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
CLGN-202ENST00000414773 FERMT3Q86UX7 667 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 SERPINA10Q9UK55 444 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 FOCADQ5VW36 1801 aa12.82□□□□□ -0.36
CLGN-202ENST00000414773 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
CLGN-202ENST00000414773 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
CLGN-202ENST00000414773 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
CLGN-202ENST00000414773 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
CLGN-202ENST00000414773 CDK8P49336 464 aa12.81□□□□□ -0.36
CLGN-202ENST00000414773 CFAP100Q494V2 611 aa12.81□□□□□ -0.36
CLGN-202ENST00000414773 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
CLGN-202ENST00000414773 FER1L6Q2WGJ9 1857 aa12.81□□□□□ -0.36
CLGN-202ENST00000414773 PSME4Q14997 1843 aa12.8□□□□□ -0.36
CLGN-202ENST00000414773 H3BQV1 296 aa12.8□□□□□ -0.36
CLGN-202ENST00000414773 RASA1P20936 1047 aa12.8□□□□□ -0.36
CLGN-202ENST00000414773 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
CLGN-202ENST00000414773 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
CLGN-202ENST00000414773 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms