RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ARMC5Q96C12 935 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RUNDC1Q96C34 613 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 NUDT16Q96DE0 195 aaKnown RBP4.46□□□□□ -1.7
SF3B1-203ENST00000414174 FAM210AQ96ND0 272 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 PCGF6Q9BYE7 350 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 TANGO6Q9C0B7 1094 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RBSNQ9H1K0 784 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 GGNBP2Q9H3C7 697 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 PIF1Q9H611 641 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 PCDH12Q9NPG4 1184 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 CASS4Q9NQ75 786 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ATG3Q9NT62 314 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 CNTN3Q9P232 1028 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ANAPC4Q9UJX5 808 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 LEMD3Q9Y2U8 911 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 HMMRO75330 724 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 PDGFAP04085 211 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 FAM163BP0C2L3 166 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 CT47B1P0C2W7 299 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 CD151P48509 253 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 KCTD2Q14681 263 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 CCSAPQ6IQ19 270 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 B4GALNT3Q6L9W6 998 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 KRT77Q7Z794 578 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 FMNL3Q8IVF7 1028 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 ABTB2Q8N961 1025 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 AGBL5Q8NDL9 886 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 GTF3C2Q8WUA4 911 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 STAG1Q8WVM7 1258 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 EDEM1Q92611 657 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 BORCS6Q96GS4 357 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 HHIPQ96QV1 700 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 SEZ6LQ9BYH1 1024 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 RASSF4Q9H2L5 321 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 RANBP17Q9H2T7 1088 aaKnown RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 CHRDQ9H2X0 955 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 ELP3Q9H9T3 547 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 DDX56Q9NY93 547 aaKnown RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 KCNK4Q9NYG8 393 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 ODF2LQ9ULJ1 636 aa4.45□□□□□ -1.7
SF3B1-203ENST00000414174 NOL7Q9UMY1 257 aaKnown RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 G3BP2Q9UN86 482 aaKnown RBP4.45□□□□□ -1.7
SF3B1-203ENST00000414174 NFKBIEO00221 500 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 COQ9O75208 318 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 FARP2O94887 1054 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 LDHCP07864 332 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 TGFB3P10600 412 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 HSD3B2P26439 372 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 EIF1AXP47813 144 aaKnown RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 HYAL2Q12891 473 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 SAFB2Q14151 953 aaKnown RBP eCLIP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 ZNF124Q15973 351 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 L1TD1Q5T7N2 865 aaKnown RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 UTP14CQ5TAP6 766 aaKnown RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 ANKRD34AQ69YU3 496 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 TXNDC11Q6PKC3 985 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 C1orf127Q8N9H9 656 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 KLHL23Q8NBE8 558 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 RELTQ969Z4 430 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 SLC39A13Q96H72 371 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 C8orf48Q96LL4 319 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 PAIP2Q9BPZ3 127 aaKnown RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 KCNF1Q9H3M0 494 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 ABI2Q9NYB9 513 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-203ENST00000414174 KANSL3Q9P2N6 904 aa4.44□□□□□ -1.7
SF3B1-203ENST00000414174 LINC01387J3KSC0 135 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 IPO8O15397 1037 aaKnown RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 SART1O43290 800 aaKnown RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 HIP1RO75146 1068 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 TRPA1O75762 1119 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 HSP90AB1P08238 724 aaKnown RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 NPR3P17342 541 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 EPHA1P21709 976 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 DUOXA2Q1HG44 320 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 HSP90B2PQ58FF3 399 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 TTC39BQ5VTQ0 682 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 PDE12Q6L8Q7 609 aaKnown RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 ZNF746Q6NUN9 644 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 JAZF1Q86VZ6 243 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 VPS37AQ8NEZ2 397 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 DHX38Q92620 1227 aaKnown RBP4.43□□□□□ -1.7
SF3B1-203ENST00000414174 MFSD14AQ96MC6 490 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 TTC14Q96N46 770 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 NEUROD6Q96NK8 337 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 LACRTQ9GZZ8 138 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 ZHX3Q9H4I2 956 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 FAM13BQ9NYF5 915 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 SALL4Q9UJQ4 1053 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 ACAD8Q9UKU7 415 aa4.43□□□□□ -1.7
SF3B1-203ENST00000414174 IFRD1O00458 451 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-203ENST00000414174 BIN1O00499 593 aa4.42□□□□□ -1.7
SF3B1-203ENST00000414174 FZD6O60353 706 aa4.42□□□□□ -1.7
SF3B1-203ENST00000414174 ADAM11O75078 769 aa4.42□□□□□ -1.7
SF3B1-203ENST00000414174 PAPLNO95428 1278 aa4.42□□□□□ -1.7
SF3B1-203ENST00000414174 IGHDP01880 384 aa4.42□□□□□ -1.7
SF3B1-203ENST00000414174 NEFHP12036 1026 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms