RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 CRACR2BQ8N4Y2 399 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-205ENST00000413758 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
COL6A2-205ENST00000413758 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
COL6A2-205ENST00000413758 ZBTB40Q9NUA8 1239 aa20.49■□□□□ 0.87
COL6A2-205ENST00000413758 PTCH2Q9Y6C5 1203 aa20.49■□□□□ 0.87
COL6A2-205ENST00000413758 COL2A1P02458 1487 aaPredicted RBP20.49■□□□□ 0.87
COL6A2-205ENST00000413758 MYO5AQ9Y4I1 1855 aaKnown RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 IGSF3O75054 1194 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 CYP2C8P10632 490 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 DYNLL1P63167 89 aaKnown RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 MAP3K12Q12852 859 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 MAGEB6Q8N7X4 407 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 PI4KBQ9UBF8 816 aa20.48■□□□□ 0.87
COL6A2-205ENST00000413758 SAP30BPQ9UHR5 308 aaKnown RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 HERC5Q9UII4 1024 aaKnown RBP20.48■□□□□ 0.87
COL6A2-205ENST00000413758 PSMC4P43686 418 aa20.47■□□□□ 0.87
COL6A2-205ENST00000413758 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
COL6A2-205ENST00000413758 ANTXR1Q9H6X2 564 aa20.47■□□□□ 0.87
COL6A2-205ENST00000413758 FLT1P17948 1338 aa20.47■□□□□ 0.87
COL6A2-205ENST00000413758 GNRH1P01148 92 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 CAP2P40123 477 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 USP5P45974 858 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 SLC4A8Q2Y0W8 1093 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 TMEM106CQ9BVX2 250 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
COL6A2-205ENST00000413758 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
COL6A2-205ENST00000413758 MYCP01106 439 aaPredicted RBP20.45■□□□□ 0.86
COL6A2-205ENST00000413758 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
COL6A2-205ENST00000413758 HOXD10P28358 340 aa20.45■□□□□ 0.86
COL6A2-205ENST00000413758 SPP2Q13103 211 aa20.45■□□□□ 0.86
COL6A2-205ENST00000413758 SMCR8Q8TEV9 937 aaPredicted RBP20.45■□□□□ 0.86
COL6A2-205ENST00000413758 DNAJC2Q99543 621 aaKnown RBP20.45■□□□□ 0.86
COL6A2-205ENST00000413758 ZSWIM8A7E2V4 1837 aa20.45■□□□□ 0.86
COL6A2-205ENST00000413758 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 USP17L5A8MUK1 530 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 TTF1Q15361 905 aaPredicted RBP20.44■□□□□ 0.86
COL6A2-205ENST00000413758 C20orf194Q5TEA3 1177 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 CERS3Q8IU89 383 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 FOXP4Q8IVH2 680 aaPredicted RBP20.44■□□□□ 0.86
COL6A2-205ENST00000413758 SIRT2Q8IXJ6 389 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 AS3MTQ9HBK9 375 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 ADGRA2Q96PE1 1338 aa20.44■□□□□ 0.86
COL6A2-205ENST00000413758 PRMT2P55345 433 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
COL6A2-205ENST00000413758 RAET1EQ8TD07 263 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 SH3TC2Q8TF17 1288 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 TBC1D2Q9BYX2 928 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 AGTPBP1Q9UPW5 1226 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 SLC45A1Q9Y2W3 748 aa20.43■□□□□ 0.86
COL6A2-205ENST00000413758 PHIPQ8WWQ0 1821 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 ATAD5Q96QE3 1844 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 GOLIM4O00461 696 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 HMGCS2P54868 508 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 FCGRTP55899 365 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 ZNF333Q96JL9 665 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 SRRDQ9UH36 339 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 PNMA3Q9UL41 463 aa20.42■□□□□ 0.86
COL6A2-205ENST00000413758 CDK5RAP2Q96SN8 1893 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 GDF11O95390 407 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 BCRP11274 1271 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 OSBPP22059 807 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 CTGFP29279 349 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 TREML2Q5T2D2 321 aa20.41■□□□□ 0.86
COL6A2-205ENST00000413758 MAGEB6P1A0A0J9YX57 407 aa20.4■□□□□ 0.86
COL6A2-205ENST00000413758 ASNSP08243 561 aa20.4■□□□□ 0.86
COL6A2-205ENST00000413758 PTPRFP10586 1907 aa20.4■□□□□ 0.86
COL6A2-205ENST00000413758 PABPC4Q13310 644 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL6A2-205ENST00000413758 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
COL6A2-205ENST00000413758 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
COL6A2-205ENST00000413758 MYPNQ86TC9 1320 aa20.4■□□□□ 0.86
COL6A2-205ENST00000413758 PROCA1Q8NCQ7 364 aaPredicted RBP20.4■□□□□ 0.86
COL6A2-205ENST00000413758 BIN2Q9UBW5 565 aaPredicted RBP20.4■□□□□ 0.86
COL6A2-205ENST00000413758 FOCADQ5VW36 1801 aa20.39■□□□□ 0.86
COL6A2-205ENST00000413758 EN2P19622 333 aaPredicted RBP20.39■□□□□ 0.85
COL6A2-205ENST00000413758 DNAJC18Q9H819 358 aa20.39■□□□□ 0.85
COL6A2-205ENST00000413758 TMOD4Q9NZQ9 345 aa20.39■□□□□ 0.85
COL6A2-205ENST00000413758 PDE6AP16499 860 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 MTMR2Q13614 643 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 TTC6Q86TZ1 520 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 ANKRD13CQ8N6S4 541 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL6A2-205ENST00000413758 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 SIPA1L1O43166 1804 aa20.38■□□□□ 0.85
COL6A2-205ENST00000413758 MYH1P12882 1939 aa20.37■□□□□ 0.85
COL6A2-205ENST00000413758 TNPO2O14787 897 aaKnown RBP20.37■□□□□ 0.85
COL6A2-205ENST00000413758 POLR3DP05423 398 aaPredicted RBP20.37■□□□□ 0.85
COL6A2-205ENST00000413758 WDR18Q9BV38 432 aa20.37■□□□□ 0.85
COL6A2-205ENST00000413758 CRNKL1Q9BZJ0 848 aaKnown RBP20.37■□□□□ 0.85
COL6A2-205ENST00000413758 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
COL6A2-205ENST00000413758 ZBTB21Q9ULJ3 1066 aa20.37■□□□□ 0.85
COL6A2-205ENST00000413758 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
COL6A2-205ENST00000413758 GRK4P32298 578 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms