RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 TCRBV5S4A2TA0A5A2 114 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 CTNND1O60716 968 aaKnown RBP17.96■□□□□ 0.47
LIMS4-201ENST00000413601 USP5P45974 858 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 CRHR2Q13324 411 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 NOM1Q5C9Z4 860 aaKnown RBP17.96■□□□□ 0.47
LIMS4-201ENST00000413601 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 FAM43AQ8N2R8 423 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 RIOK1Q9BRS2 568 aaKnown RBP17.96■□□□□ 0.47
LIMS4-201ENST00000413601 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 PICK1Q9NRD5 415 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
LIMS4-201ENST00000413601 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
LIMS4-201ENST00000413601 DDX60LQ5H9U9 1706 aaKnown RBP17.95■□□□□ 0.46
LIMS4-201ENST00000413601 PTPRAP18433 802 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 SLC4A8Q2Y0W8 1093 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 HERC5Q9UII4 1024 aaKnown RBP17.95■□□□□ 0.46
LIMS4-201ENST00000413601 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
LIMS4-201ENST00000413601 BTBD19C9JJ37 291 aa17.94■□□□□ 0.46
LIMS4-201ENST00000413601 FKTNO75072 461 aa17.94■□□□□ 0.46
LIMS4-201ENST00000413601 RRP1BQ14684 758 aaKnown RBP17.94■□□□□ 0.46
LIMS4-201ENST00000413601 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
LIMS4-201ENST00000413601 ABHD8Q96I13 439 aa17.94■□□□□ 0.46
LIMS4-201ENST00000413601 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.94■□□□□ 0.46
LIMS4-201ENST00000413601 MYH8P13535 1937 aa17.94■□□□□ 0.46
LIMS4-201ENST00000413601 CHGBP05060 677 aa17.93■□□□□ 0.46
LIMS4-201ENST00000413601 ADD2P35612 726 aa17.93■□□□□ 0.46
LIMS4-201ENST00000413601 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 AAMPQ13685 434 aa17.93■□□□□ 0.46
LIMS4-201ENST00000413601 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 FOXP4Q8IVH2 680 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 CRACR2BQ8N4Y2 399 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
LIMS4-201ENST00000413601 HLA-DOAP06340 250 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 CAP2P40123 477 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 CTU1Q7Z7A3 348 aaKnown RBP17.92■□□□□ 0.46
LIMS4-201ENST00000413601 LCORLQ8N3X6 602 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 TRIM34Q9BYJ4 488 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 CRNKL1Q9BZJ0 848 aaKnown RBP17.92■□□□□ 0.46
LIMS4-201ENST00000413601 DNAJC18Q9H819 358 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 AFG3L2Q9Y4W6 797 aa17.92■□□□□ 0.46
LIMS4-201ENST00000413601 CXCL11O14625 94 aa17.91■□□□□ 0.46
LIMS4-201ENST00000413601 MOGSQ13724 837 aa17.91■□□□□ 0.46
LIMS4-201ENST00000413601 METTL16Q86W50 562 aaKnown RBP17.91■□□□□ 0.46
LIMS4-201ENST00000413601 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
LIMS4-201ENST00000413601 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
LIMS4-201ENST00000413601 ZFYVE28Q9HCC9 887 aa17.91■□□□□ 0.46
LIMS4-201ENST00000413601 ANKRD23Q86SG2 305 aa17.9■□□□□ 0.46
LIMS4-201ENST00000413601 SDR42E1Q8WUS8 393 aa17.9■□□□□ 0.46
LIMS4-201ENST00000413601 ZCCHC17Q9NP64 241 aaKnown RBP17.9■□□□□ 0.46
LIMS4-201ENST00000413601 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
LIMS4-201ENST00000413601 ZSWIM8A7E2V4 1837 aa17.9■□□□□ 0.46
LIMS4-201ENST00000413601 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
LIMS4-201ENST00000413601 LOC285556D6RIA3 1793 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 A0A0G2JLL6 359 aaPredicted RBP17.89■□□□□ 0.45
LIMS4-201ENST00000413601 TRIM75PA6NK02 468 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 MBD4O95243 580 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 JAG1P78504 1218 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 ZSCAN25Q6NSZ9 544 aa17.89■□□□□ 0.45
LIMS4-201ENST00000413601 PRRT2Q7Z6L0 340 aaPredicted RBP17.89■□□□□ 0.45
LIMS4-201ENST00000413601 PDHXO00330 501 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 ERC2O15083 957 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 MX1P20591 662 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 PLCD1P51178 756 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 SP3Q02447 781 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 SHROOM1Q2M3G4 852 aaPredicted RBP17.88■□□□□ 0.45
LIMS4-201ENST00000413601 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 GADL1Q6ZQY3 521 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 KBTBD3Q8NAB2 608 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
LIMS4-201ENST00000413601 SERPINB13Q9UIV8 391 aa17.88■□□□□ 0.45
LIMS4-201ENST00000413601 USP17L5A8MUK1 530 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 PRKAB2O43741 272 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 TLR2O60603 784 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 GDF11O95390 407 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 POLR3DP05423 398 aaPredicted RBP17.87■□□□□ 0.45
LIMS4-201ENST00000413601 SPP2Q13103 211 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 FASTKD5Q7L8L6 764 aaKnown RBP17.87■□□□□ 0.45
LIMS4-201ENST00000413601 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 ERO1AQ96HE7 468 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 PUS7LQ9H0K6 701 aaKnown RBP17.87■□□□□ 0.45
LIMS4-201ENST00000413601 EHD4Q9H223 541 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 DCP1AQ9NPI6 582 aaPredicted RBP17.87■□□□□ 0.45
LIMS4-201ENST00000413601 MCM9Q9NXL9 1143 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 SALL3Q9BXA9 1300 aa17.87■□□□□ 0.45
LIMS4-201ENST00000413601 MGAMO43451 1857 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 CCDC85CA6NKD9 419 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
LIMS4-201ENST00000413601 IGHDP01880 384 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 ASNSP08243 561 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 IRX6P78412 446 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms