RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
LITAF-203ENST00000413364 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
LITAF-203ENST00000413364 MAP3K11Q16584 847 aa15.03■□□□□ -0
LITAF-203ENST00000413364 SLC27A3Q5K4L6 730 aa15.03■□□□□ -0
LITAF-203ENST00000413364 OTUD7BQ6GQQ9 843 aa15.03■□□□□ -0
LITAF-203ENST00000413364 MICU3Q86XE3 530 aa15.03■□□□□ -0
LITAF-203ENST00000413364 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
LITAF-203ENST00000413364 CLSTN2Q9H4D0 955 aa15.03■□□□□ -0
LITAF-203ENST00000413364 SLC12A7Q9Y666 1083 aa15.03■□□□□ -0
LITAF-203ENST00000413364 NID2Q14112 1375 aa15.03■□□□□ -0
LITAF-203ENST00000413364 CCDC69A6NI79 296 aa15.03■□□□□ -0
LITAF-203ENST00000413364 CDC27P30260 824 aa15.03■□□□□ -0
LITAF-203ENST00000413364 NOP2P46087 812 aaKnown RBP15.03■□□□□ -0
LITAF-203ENST00000413364 CEBPZQ03701 1054 aaKnown RBP15.03■□□□□ -0
LITAF-203ENST00000413364 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
LITAF-203ENST00000413364 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
LITAF-203ENST00000413364 NSUN4Q96CB9 384 aaKnown RBP15.03■□□□□ -0
LITAF-203ENST00000413364 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
LITAF-203ENST00000413364 RASSF4Q9H2L5 321 aa15.03■□□□□ -0
LITAF-203ENST00000413364 FAM217BQ9NTX9 383 aaPredicted RBP15.03■□□□□ -0
LITAF-203ENST00000413364 RXRAP19793 462 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 DYNLL1P63167 89 aaKnown RBP15.02□□□□□ -0.01
LITAF-203ENST00000413364 BRAPQ7Z569 592 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 TOMM22Q9NS69 142 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 RTEL1Q9NZ71 1219 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 CEP83Q9Y592 693 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 UBR3Q6ZT12 1888 aa15.02□□□□□ -0.01
LITAF-203ENST00000413364 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 MECOMQ03112 1051 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 NTRK3Q16288 839 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 PRR5LQ6MZQ0 368 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 SYNE3Q6ZMZ3 975 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 RSPH14Q9UHP6 348 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 LEMD3Q9Y2U8 911 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 NR1I2O75469 434 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 GYS1P13807 737 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 ICE2Q659A1 982 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 RBM43Q6ZSC3 357 aaKnown RBP15.01□□□□□ -0.01
LITAF-203ENST00000413364 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 TMTC2Q8N394 836 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 ALG1Q9BT22 464 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 MYL10Q9BUA6 226 aa15.01□□□□□ -0.01
LITAF-203ENST00000413364 MYH13Q9UKX3 1938 aa15□□□□□ -0.01
LITAF-203ENST00000413364 STK36Q9NRP7 1315 aa15□□□□□ -0.01
LITAF-203ENST00000413364 ERICH2A1L162 156 aa15□□□□□ -0.01
LITAF-203ENST00000413364 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
LITAF-203ENST00000413364 WTAPQ15007 396 aa15□□□□□ -0.01
LITAF-203ENST00000413364 CAMK4Q16566 473 aa15□□□□□ -0.01
LITAF-203ENST00000413364 ANKIB1Q9P2G1 1089 aa15□□□□□ -0.01
LITAF-203ENST00000413364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
LITAF-203ENST00000413364 IARSP41252 1262 aaKnown RBP15□□□□□ -0.01
LITAF-203ENST00000413364 RCAN1P53805 252 aa15□□□□□ -0.01
LITAF-203ENST00000413364 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
LITAF-203ENST00000413364 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
LITAF-203ENST00000413364 ESR2Q92731 530 aa15□□□□□ -0.01
LITAF-203ENST00000413364 GJB4Q9NTQ9 266 aa15□□□□□ -0.01
LITAF-203ENST00000413364 XDHP47989 1333 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 GOLGA6L6A8MZA4 724 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 RANBP6O60518 1105 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 CCDC172P0C7W6 258 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 CRY2Q49AN0 593 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 SPTY2D1Q68D10 685 aaPredicted RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 PHKBQ93100 1093 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 UBAC1Q9BSL1 405 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 MAST2Q6P0Q8 1798 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 POLR3DP05423 398 aaPredicted RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 IFNAR1P17181 557 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 PRDX5P30044 214 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 ST5P78524 1137 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 RAD51AP2Q09MP3 1159 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 MYSM1Q5VVJ2 828 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 C15orf52Q6ZUT6 534 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 EGFL6Q8IUX8 553 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 RPGRQ92834 1020 aaKnown RBP14.99□□□□□ -0.01
LITAF-203ENST00000413364 AIFM3Q96NN9 605 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 POLR3EQ9NVU0 708 aa14.99□□□□□ -0.01
LITAF-203ENST00000413364 KIF28PB7ZC32 967 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
LITAF-203ENST00000413364 YEATS4O95619 227 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 SERPINB2P05120 415 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 FGRP09769 529 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 TYRO3Q06418 890 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 SSRP1Q08945 709 aaKnown RBP14.98□□□□□ -0.01
LITAF-203ENST00000413364 KRT40Q6A162 431 aa14.98□□□□□ -0.01
LITAF-203ENST00000413364 CRNKL1Q9BZJ0 848 aaKnown RBP14.98□□□□□ -0.01
LITAF-203ENST00000413364 TRIM37O94972 964 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 ME1P48163 572 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 SEC23AQ15436 765 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 RTN1Q16799 776 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 LINC00301Q8NCQ3 95 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 KIF18AQ8NI77 898 aa14.97□□□□□ -0.01
LITAF-203ENST00000413364 DUOX1Q9NRD9 1551 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms