RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 Q6ZUG5 572 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 KLHDC4Q8TBB5 520 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 MYOM2P54296 1465 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 CHMLP26374 656 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 GBP1P32455 592 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 NAA30Q147X3 362 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-209ENST00000412587 ALG1Q9BT22 464 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 VCX3BQ9H321 246 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 ZSCAN16Q9H4T2 348 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-209ENST00000412587 VCX3AQ9NNX9 186 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 KIAA0232Q92628 1395 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 UBA5Q9GZZ9 404 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 DENND2AQ9ULE3 1009 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 JAG2Q9Y219 1238 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-209ENST00000412587 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 TTC19Q6DKK2 380 aaPredicted RBP9.54□□□□□ -0.88
PBRM1-209ENST00000412587 ARHGEF25Q86VW2 580 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 DBNDD2Q9BQY9 259 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 IFNKQ9P0W0 207 aa9.54□□□□□ -0.88
PBRM1-209ENST00000412587 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
PBRM1-209ENST00000412587 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 CDC25BP30305 580 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 MAP7Q14244 749 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 PUM3Q15397 648 aaKnown RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 TNNI3KQ59H18 835 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC129Q6ZRS4 1044 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 GBP7Q8N8V2 638 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 RNF217Q8TC41 542 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 TBC1D22AQ8WUA7 517 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.883e-10■■■■■ 153.8
PBRM1-209ENST00000412587 BSDC1Q9NW68 430 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 PPP4R3AQ6IN85 833 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 DAAM2Q86T65 1068 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 CALML4Q96GE6 196 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 TSG101Q99816 390 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 KDM6BO15054 1643 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 KCNQ3O43525 872 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 MYZAPP0CAP1 466 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 IDEP14735 1019 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 DYNC1I2Q13409 638 aaKnown RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 ZNF569Q5MCW4 686 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 CREB3L3Q68CJ9 461 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 PPFIBP2Q8ND30 876 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 DTNBP1Q96EV8 351 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 ACTR5Q9H9F9 607 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-209ENST00000412587 AATKQ6ZMQ8 1374 aa9.53□□□□□ -0.88
PBRM1-209ENST00000412587 PHLPP2Q6ZVD8 1323 aa9.52□□□□□ -0.88
PBRM1-209ENST00000412587 UFL1O94874 794 aa9.52□□□□□ -0.88
PBRM1-209ENST00000412587 KARSQ15046 597 aaKnown RBP9.52□□□□□ -0.88
PBRM1-209ENST00000412587 CFAP58Q5T655 872 aa9.52□□□□□ -0.88
PBRM1-209ENST00000412587 GBP5Q96PP8 586 aa9.52□□□□□ -0.88
PBRM1-209ENST00000412587 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.88
PBRM1-209ENST00000412587 SAMD15Q9P1V8 674 aa9.52□□□□□ -0.88
PBRM1-209ENST00000412587 KDM5AP29375 1690 aaKnown RBP9.52□□□□□ -0.89
PBRM1-209ENST00000412587 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 HIBADHP31937 336 aaKnown RBP9.52□□□□□ -0.89
PBRM1-209ENST00000412587 GOLGA8KD6RF30 607 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 YEATS4O95619 227 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.89
PBRM1-209ENST00000412587 MBD4O95243 580 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 TCIRG1Q13488 830 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 HLTFQ14527 1009 aaKnown RBP eCLIP9.52□□□□□ -0.894e-6■■■■□ 22.5
PBRM1-209ENST00000412587 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
PBRM1-209ENST00000412587 OSBPL9Q96SU4 736 aa9.52□□□□□ -0.89
PBRM1-209ENST00000412587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.897e-7■■■■□ 21.4
PBRM1-209ENST00000412587 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
PBRM1-209ENST00000412587 RNF40O75150 1001 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 AMPD3Q01432 767 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 SPA17Q15506 151 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CACNA2D4Q7Z3S7 1137 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CACNA2D3Q8IZS8 1091 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PAF1Q8N7H5 531 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 TAF4BQ92750 862 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 XAGE2Q96GT9 111 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 BAG1Q99933 345 aaPredicted RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PYM1Q9BRP8 204 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 YIPF3Q9GZM5 350 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 ZCCHC17Q9NP64 241 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 USO1O60763 962 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 SNUPNO95149 360 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PRPHP41219 470 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 VAV2P52735 878 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 APOBRQ0VD83 1088 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 FKBP15Q5T1M5 1219 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms