RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 POLR2BP30876 1174 aaKnown RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 GARSP41250 739 aaKnown RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 PHEXP78562 749 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC186Q7Z3E2 898 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 AOPEPQ8N6M6 819 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 OPTNQ96CV9 577 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 GIMAP4Q9NUV9 329 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 COPG1Q9Y678 874 aaKnown RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 LMNB1P20700 586 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 ANKRD2Q9GZV1 360 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 LRCH2Q5VUJ6 765 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC25Q86WR0 208 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TSC1Q92574 1164 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TRIM15Q9C019 465 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 MID2Q9UJV3 735 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 IPO5O00410 1097 aaKnown RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 MRPL40Q9NQ50 206 aaKnown RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 FGFR1OP2Q9NVK5 253 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TNFAIP3P21580 790 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TNNI2P48788 182 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 ATP6V0A1Q93050 837 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TEX12Q9BXU0 123 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 ANKFY1Q9P2R3 1169 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
PTPN3-203ENST00000412145 KLF18A0A0U1RQI7 1052 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC169A6NNP5 214 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 FLIIQ13045 1269 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 FAM96AQ9H5X1 160 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 MAGEF1Q9HAY2 307 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 TAF11Q15544 211 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 ASIC2Q16515 512 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 MCF2L2Q86YR7 1114 aa8.18□□□□□ -1.1
PTPN3-203ENST00000412145 PRPF6O94906 941 aaKnown RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CDR2Q01850 454 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 NUCB1Q02818 461 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 PPP2R5AQ15172 486 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 SMIM24O75264 130 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 MCM7P33993 719 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 STRN3Q13033 797 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 PRPF38AQ8NAV1 312 aaKnown RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 GDAP1L1Q96MZ0 367 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 AFG3L2Q9Y4W6 797 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CD2APQ9Y5K6 639 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 KDM3AQ9Y4C1 1321 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 GCKP35557 465 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CDKL2Q92772 493 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CARD10Q9BWT7 1032 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 ZSWIM4Q9H7M6 989 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CNOT10Q9H9A5 744 aaKnown RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 DAPK3O43293 454 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 LMNAP02545 664 aaKnown RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 NFKBIAP25963 317 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 FNBP4Q8N3X1 1017 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC85AQ96PX6 553 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 MYO1AQ9UBC5 1043 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 PPIP5K1Q6PFW1 1433 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 HEATR3Q7Z4Q2 680 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 CCPG1Q9ULG6 757 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 ITSN2Q9NZM3 1697 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 TLDC2A0PJX2 215 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 MAN1A2O60476 641 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 SRGAP2BP0DMP2 458 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 TEKT2Q9UIF3 430 aa8.17□□□□□ -1.1
PTPN3-203ENST00000412145 IQSEC3Q9UPP2 1182 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-203ENST00000412145 RGS16O15492 202 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 STX2P32856 288 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 HSPA2P54652 639 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 IDI1Q13907 227 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 LRGUKQ96M69 825 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 EYA3Q99504 573 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 CENPKQ9BS16 269 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 NT5C3AQ9H0P0 336 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 SYNRGQ9UMZ2 1314 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 CADPS2Q86UW7 1296 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 STAG1Q8WVM7 1258 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 NUP160Q12769 1436 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 ZNF449Q6P9G9 518 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 TXLNGQ9NUQ3 528 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 MAD1L1Q9Y6D9 718 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 CCT2P78371 535 aaKnown RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 SNCBQ16143 134 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 USHBP1Q8N6Y0 703 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 TTC25Q96NG3 672 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 NOC4LQ9BVI4 516 aaKnown RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 S100BP04271 92 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 ASIC3Q9UHC3 531 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 PFDN1O60925 122 aa8.16□□□□□ -1.1
PTPN3-203ENST00000412145 ATF7P17544 494 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-203ENST00000412145 KRT15P19012 456 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms