RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 AATFQ9NY61 560 aaKnown RBP eCLIP20.3■□□□□ 0.845e-6■■□□□ 11.7
SCAMP4-203ENST00000411971 LRP2BPQ9P2M1 347 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 NOP58Q9Y2X3 529 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 NDUFB9Q9Y6M9 179 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 LDHCP07864 332 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 GSTO1P78417 241 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 PRKCZQ05513 592 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 TTC39AQ5SRH9 613 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 TEX11Q8IYF3 940 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 PARK7Q99497 189 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 TMEM106CQ9BVX2 250 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 MYH1P12882 1939 aa20.29■□□□□ 0.84
SCAMP4-203ENST00000411971 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-203ENST00000411971 DIEXFQ68CQ4 756 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-203ENST00000411971 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
SCAMP4-203ENST00000411971 MYPNQ86TC9 1320 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 GNRH1P01148 92 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 DYNLL1P63167 89 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 SLC4A8Q2Y0W8 1093 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 FASTKD5Q7L8L6 764 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 MAPKAPK5Q8IW41 473 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 PLXNB2O15031 1838 aa20.27■□□□□ 0.84
SCAMP4-203ENST00000411971 CEP290O15078 2479 aa20.27■□□□□ 0.83
SCAMP4-203ENST00000411971 CAP2P40123 477 aa20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 SPP2Q13103 211 aa20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 NAA16Q6N069 864 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 FTSJ3Q8IY81 847 aaKnown RBP20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 TGFBRAP1Q8WUH2 860 aa20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 ZNF512BQ96KM6 892 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-203ENST00000411971 GRK4P32298 578 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 PRMT2P55345 433 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 PPP4CP60510 307 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 ANTXR1Q9H6X2 564 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 AGTPBP1Q9UPW5 1226 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 EXOC6BQ9Y2D4 811 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 SLC45A1Q9Y2W3 748 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 FLT1P17948 1338 aa20.25■□□□□ 0.83
SCAMP4-203ENST00000411971 PEX10O60683 326 aa20.24■□□□□ 0.83
SCAMP4-203ENST00000411971 MAP4K4O95819 1239 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-203ENST00000411971 RAET1EQ8TD07 263 aa20.24■□□□□ 0.83
SCAMP4-203ENST00000411971 PALD1Q9ULE6 856 aa20.24■□□□□ 0.83
SCAMP4-203ENST00000411971 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
SCAMP4-203ENST00000411971 HMGCS2P54868 508 aa20.23■□□□□ 0.83
SCAMP4-203ENST00000411971 ANKRD13CQ8N6S4 541 aa20.23■□□□□ 0.83
SCAMP4-203ENST00000411971 SAP30BPQ9UHR5 308 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-203ENST00000411971 DDX60LQ5H9U9 1706 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 CCL5P13501 91 aa20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 ELNP15502 786 aa20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 FLT3LGP49771 235 aa20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 FCGRTP55899 365 aa20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 METTL16Q86W50 562 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 ZNF280CQ8ND82 737 aa20.22■□□□□ 0.83
SCAMP4-203ENST00000411971 HOXD10P28358 340 aa20.21■□□□□ 0.83
SCAMP4-203ENST00000411971 UNC93B1Q9H1C4 597 aa20.21■□□□□ 0.83
SCAMP4-203ENST00000411971 USP17L5A8MUK1 530 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 GDF11O95390 407 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 CYP7A1P22680 504 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 EVX2Q03828 476 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 SH3D19Q5HYK7 790 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 SIRT2Q8IXJ6 389 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 PROCA1Q8NCQ7 364 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 SMCR8Q8TEV9 937 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 IL1RAPL2Q9NP60 686 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 HERC5Q9UII4 1024 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-203ENST00000411971 ALPK3Q96L96 1907 aa20.19■□□□□ 0.82
SCAMP4-203ENST00000411971 ADCY3O60266 1144 aa20.19■□□□□ 0.82
SCAMP4-203ENST00000411971 BAG3O95817 575 aa20.19■□□□□ 0.82
SCAMP4-203ENST00000411971 POTEEQ6S8J3 1075 aa20.19■□□□□ 0.82
SCAMP4-203ENST00000411971 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
SCAMP4-203ENST00000411971 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 MTMR2Q13614 643 aa20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 AACSQ86V21 672 aa20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 NOL10Q9BSC4 688 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 RNF208Q9H0X6 261 aa20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 DHX36Q9H2U1 1008 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-203ENST00000411971 TNPO2O14787 897 aaKnown RBP20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 GJB1P08034 283 aa20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 GJA8P48165 433 aa20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 WDR18Q9BV38 432 aa20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 NAV1Q8NEY1 1877 aa20.17■□□□□ 0.82
SCAMP4-203ENST00000411971 H0YGN5 161 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 INHAP05111 366 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 PLCG2P16885 1265 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 FAM110CQ1W6H9 321 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 FOXP4Q8IVH2 680 aaPredicted RBP20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 SLAIN1Q8ND83 568 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 RHPN1Q8TCX5 695 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 TXNRD2Q9NNW7 524 aa20.16■□□□□ 0.82
SCAMP4-203ENST00000411971 ZBTB21Q9ULJ3 1066 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms