RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
HMGN1P20-201ENST00000411849 DAGLAQ9Y4D2 1042 aa7.53□□□□□ -1.2
HMGN1P20-201ENST00000411849 AFG3L2Q9Y4W6 797 aa7.53□□□□□ -1.2
HMGN1P20-201ENST00000411849 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
HMGN1P20-201ENST00000411849 LTBP2Q14767 1821 aa7.52□□□□□ -1.2
HMGN1P20-201ENST00000411849 CDK5RAP2Q96SN8 1893 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 ATRNL1Q5VV63 1379 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 TRIM75PA6NK02 468 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 PHF20L1A8MW92 1017 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 ENTPD3O75355 529 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 LDHBP07195 334 aaKnown RBP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 SLC5A1P13866 664 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 GCLCP48506 637 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 NFIAQ12857 509 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 PABPC4Q13310 644 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 DIXDC1Q155Q3 683 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 LRRC24Q50LG9 513 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 FAM109BQ6ICB4 259 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 SLC4A10Q6U841 1118 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 PROCA1Q8NCQ7 364 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 SUCLG2Q96I99 432 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 UTYO14607 1347 aa7.52□□□□□ -1.21
HMGN1P20-201ENST00000411849 COL6A3P12111 3177 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 COL2A1P02458 1487 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 FOCADQ5VW36 1801 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 SEC24BO95487 1268 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 NBPF7P0C2Y1 421 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 RGS3P49796 1198 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 RABL6Q3YEC7 729 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZSCAN29Q8IWY8 852 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 LPIN2Q92539 896 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 KAZALD1Q96I82 304 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 IDI2Q9BXS1 227 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 BICC1Q9H694 974 aaKnown RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 GNL3LQ9NVN8 582 aaKnown RBP7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 OGDHLQ9ULD0 1010 aa7.51□□□□□ -1.21
HMGN1P20-201ENST00000411849 FGFR2P21802 821 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 PRDX5P30044 214 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 MAP3K10Q02779 954 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZFPM1Q8IX07 1006 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 TRMT44Q8IYL2 757 aaKnown RBP7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZGPATQ8N5A5 531 aaKnown RBP7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 RLFQ13129 1914 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 SALL1Q9NSC2 1324 aa7.5□□□□□ -1.21
HMGN1P20-201ENST00000411849 RFX7Q2KHR2 1363 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 SEMA3EO15041 775 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 ST18O60284 1047 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 TREML2Q5T2D2 321 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 MAP3K21Q5TCX8 1036 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZNF697Q5TEC3 545 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 WDR63Q8IWG1 891 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 SLF2Q8IX21 1173 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 ANKRD44Q8N8A2 993 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 TRIB2Q92519 343 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 LBHD1Q9BQE6 289 aaPredicted RBP7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 GJD2Q9UKL4 321 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 DENND2AQ9ULE3 1009 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 PFASO15067 1338 aa7.49□□□□□ -1.21
HMGN1P20-201ENST00000411849 SIPA1L1O43166 1804 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 EYA2O00167 538 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 TBC1D12O60347 775 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 COL6A1P12109 1028 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 TRIM32Q13049 653 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 DZIP1Q86YF9 867 aaKnown RBP7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZNF280CQ8ND82 737 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 KLHDC4Q8TBB5 520 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 SOCS4Q8WXH5 440 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 FAM212AQ96EL1 285 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 GUCD1Q96NT3 240 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 OSBPL5Q9H0X9 879 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 ASCC2Q9H1I8 757 aaPredicted RBP7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 PRDM6Q9NQX0 595 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 MORF4L1Q9UBU8 362 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 GAKO14976 1311 aa7.48□□□□□ -1.21
HMGN1P20-201ENST00000411849 MYH1P12882 1939 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 DDTLA6NHG4 134 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZKSCAN1P17029 563 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 CYP2B6P20813 491 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 HMGCS2P54868 508 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 IRX3P78415 501 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 SPP2Q13103 211 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 PICALMQ13492 652 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 ATP2B3Q16720 1220 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 LRRC26Q2I0M4 334 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 SPTY2D1Q68D10 685 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 CCAR1Q8IX12 1150 aaKnown RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 SYMPKQ92797 1274 aaKnown RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 FAM161BQ96MY7 647 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 AS3MTQ9HBK9 375 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms