RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 SOGA3Q5TF21 947 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 SERPINA10Q9UK55 444 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 AKAP2Q9Y2D5 859 aa10.54□□□□□ -0.72
CCDC196-203ENST00000411796 UPP2O95045 317 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 BMP2P12643 396 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
CCDC196-203ENST00000411796 IGHMBP2P38935 993 aaKnown RBP10.53□□□□□ -0.72
CCDC196-203ENST00000411796 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC196-203ENST00000411796 SCARF1Q14162 830 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 EML3Q32P44 896 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 SP8Q8IXZ3 490 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 ZNF526Q8TF50 670 aaPredicted RBP10.53□□□□□ -0.72
CCDC196-203ENST00000411796 KIF1BPQ96EK5 621 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 ANKRD2Q9GZV1 360 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 TMX4Q9H1E5 349 aaPredicted RBP10.53□□□□□ -0.72
CCDC196-203ENST00000411796 RIPOR2Q9Y4F9 1068 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 PCNTO95613 3336 aa10.53□□□□□ -0.72
CCDC196-203ENST00000411796 ANKRD36CQ5JPF3 1778 aa10.52□□□□□ -0.72
CCDC196-203ENST00000411796 EYA2O00167 538 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 ITGA6P23229 1130 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 TMED8Q6PL24 325 aaPredicted RBP10.52□□□□□ -0.73
CCDC196-203ENST00000411796 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 CCDC97Q96F63 343 aaPredicted RBP10.52□□□□□ -0.73
CCDC196-203ENST00000411796 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
CCDC196-203ENST00000411796 SPINT1O43278 529 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 STAU1O95793 577 aaKnown RBP10.51□□□□□ -0.73
CCDC196-203ENST00000411796 GRAPQ13588 217 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 EPHA10Q5JZY3 1008 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 C15orf52Q6ZUT6 534 aaKnown RBP10.51□□□□□ -0.73
CCDC196-203ENST00000411796 CYP2U1Q7Z449 544 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 GRAPLQ8TC17 118 aaPredicted RBP10.51□□□□□ -0.73
CCDC196-203ENST00000411796 RPGRQ92834 1020 aaKnown RBP10.51□□□□□ -0.73
CCDC196-203ENST00000411796 MPHOSPH8Q99549 860 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 PCDHGA11Q9Y5H2 935 aa10.51□□□□□ -0.73
CCDC196-203ENST00000411796 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 PNMA6EA0A0J9YXQ4 647 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 SURF6O75683 361 aaKnown RBP10.5□□□□□ -0.73
CCDC196-203ENST00000411796 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
CCDC196-203ENST00000411796 RFX1P22670 979 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 NUCB1Q02818 461 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 UBE4AQ14139 1066 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 ZNF512BQ96KM6 892 aaPredicted RBP10.5□□□□□ -0.73
CCDC196-203ENST00000411796 INSM2Q96T92 566 aaPredicted RBP10.5□□□□□ -0.73
CCDC196-203ENST00000411796 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
CCDC196-203ENST00000411796 KDM2BQ8NHM5 1336 aa10.5□□□□□ -0.73
CCDC196-203ENST00000411796 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
CCDC196-203ENST00000411796 PDE8BO95263 885 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 GNRH1P01148 92 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 YBX3P16989 372 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC196-203ENST00000411796 MMP14P50281 582 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
CCDC196-203ENST00000411796 ARID3AQ99856 593 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 GREM2Q9H772 168 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 PIM2Q9P1W9 311 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 ATP6V0A2Q9Y487 856 aa10.49□□□□□ -0.73
CCDC196-203ENST00000411796 IGHDP01880 384 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
CCDC196-203ENST00000411796 CTSOP43234 321 aaPredicted RBP10.48□□□□□ -0.73
CCDC196-203ENST00000411796 GTF2IP78347 998 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 RTKN2Q8IZC4 609 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 SYNE4Q8N205 404 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 TTLL6Q8N841 843 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 NLGN2Q8NFZ4 835 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 ARHGEF10LQ9HCE6 1279 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 C10orf71Q711Q0 1435 aa10.48□□□□□ -0.73
CCDC196-203ENST00000411796 KCNA3P22001 575 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 ATP2B4P23634 1241 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 ATG9AQ7Z3C6 839 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 C2CD5Q86YS7 1000 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 SUPT20HQ8NEM7 779 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC196-203ENST00000411796 C7orf43Q8WVR3 580 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 LPIN2Q92539 896 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 RTFDC1Q9BY42 306 aaPredicted RBP10.47□□□□□ -0.73
CCDC196-203ENST00000411796 CNNM1Q9NRU3 951 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 MINPP1Q9UNW1 487 aa10.47□□□□□ -0.73
CCDC196-203ENST00000411796 MEN1O00255 615 aa10.46□□□□□ -0.73
CCDC196-203ENST00000411796 SASH1O94885 1247 aa10.46□□□□□ -0.73
CCDC196-203ENST00000411796 CLDN10P78369 228 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms