RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 KRT83P78385 493 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 BICC1Q9H694 974 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 CALCOCO2Q13137 446 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 RPS6KA2Q15349 733 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 GLG1Q92896 1179 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 MYCT1Q8N699 235 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 ATP6V1E1P36543 226 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 KRT81Q14533 505 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 FBXW4P57775 412 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 SETDB1Q15047 1291 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 ARFGAP3Q9NP61 516 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 MICAL3Q7RTP6 2002 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
PRPF40A-202ENST00000410080 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 RHOXF2BP0C7M4 288 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 RHOXF2Q9BQY4 288 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 MAPK8IP1Q9UQF2 711 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 ZNF131P52739 623 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 ST7Q9NRC1 585 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 NUCB1Q02818 461 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 DCLK2Q8N568 766 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 SAT1P21673 171 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 IGBP1P78318 339 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 CFBP00751 764 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 TNNI1P19237 187 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 KRT33BQ14525 404 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
PRPF40A-202ENST00000410080 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 SLC4A1P02730 911 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 P4HA1P13674 534 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 UBL4BQ8N7F7 174 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 NXNQ6DKJ4 435 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 TEX14Q8IWB6 1497 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 GANCQ8TET4 914 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 ASIC2Q16515 512 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 APOL6Q9BWW8 343 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 CCDC26Q8TAB7 109 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 ABCF3Q9NUQ8 709 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
PRPF40A-202ENST00000410080 CD19P15391 556 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 XPAP23025 273 aaPredicted RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 SF3A3Q12874 501 aaKnown RBP eCLIP12.48□□□□□ -0.418e-7■□□□□ 9.9
PRPF40A-202ENST00000410080 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 ARHGEF2Q92974 986 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 ZSCAN22P10073 491 aaPredicted RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 ATP5DP30049 168 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 NOC4LQ9BVI4 516 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 DENND2AQ9ULE3 1009 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 KIF1BO60333 1816 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 PDE6AP16499 860 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 FAM102BQ5T8I3 360 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 CETN3O15182 167 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 ATP11AP98196 1134 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms