RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 MAP3K10Q02779 954 aa19.81■□□□□ 0.76
SUMO1-208ENST00000409627 FMR1Q06787 632 aaKnown RBP eCLIP19.81■□□□□ 0.76
SUMO1-208ENST00000409627 SLC4A8Q2Y0W8 1093 aa19.81■□□□□ 0.76
SUMO1-208ENST00000409627 CTNNA3Q9UI47 895 aa19.81■□□□□ 0.76
SUMO1-208ENST00000409627 HERC5Q9UII4 1024 aaKnown RBP19.81■□□□□ 0.76
SUMO1-208ENST00000409627 SERPINB13Q9UIV8 391 aa19.81■□□□□ 0.76
SUMO1-208ENST00000409627 U3KPZ7 1027 aaPredicted RBP19.81■□□□□ 0.76
SUMO1-208ENST00000409627 CYP2D7A0A087X1C5 515 aa19.8■□□□□ 0.76
SUMO1-208ENST00000409627 MINDY4BA8MYZ0 360 aa19.8■□□□□ 0.76
SUMO1-208ENST00000409627 GABPAQ06546 454 aa19.8■□□□□ 0.76
SUMO1-208ENST00000409627 PPARAQ07869 468 aa19.8■□□□□ 0.76
SUMO1-208ENST00000409627 EPB41L2O43491 1005 aaKnown RBP19.79■□□□□ 0.76
SUMO1-208ENST00000409627 CELF2O95319 508 aaKnown RBP19.79■□□□□ 0.76
SUMO1-208ENST00000409627 EVX2Q03828 476 aa19.79■□□□□ 0.76
SUMO1-208ENST00000409627 CRACR2BQ8N4Y2 399 aaPredicted RBP19.79■□□□□ 0.76
SUMO1-208ENST00000409627 ANAPC4Q9UJX5 808 aa19.79■□□□□ 0.76
SUMO1-208ENST00000409627 RBM8AQ9Y5S9 174 aaKnown RBP19.79■□□□□ 0.76
SUMO1-208ENST00000409627 ATAD5Q96QE3 1844 aa19.79■□□□□ 0.76
SUMO1-208ENST00000409627 PPP1R12BO60237 982 aaPredicted RBP19.78■□□□□ 0.76
SUMO1-208ENST00000409627 FKBP1BP68106 108 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 C16orf86Q6ZW13 317 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 MIGA2Q7L4E1 593 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 ZNF341Q9BYN7 854 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 DNAJC18Q9H819 358 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 ZNF408Q9H9D4 720 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
SUMO1-208ENST00000409627 SWAP70Q9UH65 585 aa19.78■□□□□ 0.76
SUMO1-208ENST00000409627 DOCK1Q14185 1865 aa19.77■□□□□ 0.76
SUMO1-208ENST00000409627 SMIM22K7EJ46 135 aa19.77■□□□□ 0.76
SUMO1-208ENST00000409627 ZNF213O14771 459 aa19.77■□□□□ 0.76
SUMO1-208ENST00000409627 SLC3A2P08195 630 aaKnown RBP19.77■□□□□ 0.76
SUMO1-208ENST00000409627 MAP3K11Q16584 847 aa19.77■□□□□ 0.76
SUMO1-208ENST00000409627 IMMTQ16891 758 aaKnown RBP19.77■□□□□ 0.76
SUMO1-208ENST00000409627 CST9Q5W186 159 aa19.77■□□□□ 0.76
SUMO1-208ENST00000409627 GBA2Q9HCG7 927 aaPredicted RBP19.77■□□□□ 0.76
SUMO1-208ENST00000409627 FAM196BA6NMK8 535 aa19.76■□□□□ 0.75
SUMO1-208ENST00000409627 USP2O75604 605 aaPredicted RBP19.76■□□□□ 0.75
SUMO1-208ENST00000409627 SLURP2P0DP57 97 aa19.76■□□□□ 0.75
SUMO1-208ENST00000409627 KLRG1Q96E93 195 aa19.76■□□□□ 0.75
SUMO1-208ENST00000409627 DYNLL2Q96FJ2 89 aa19.76■□□□□ 0.75
SUMO1-208ENST00000409627 ZNF112Q9UJU3 913 aa19.76■□□□□ 0.75
SUMO1-208ENST00000409627 SHMT1P34896 483 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 IREB2P48200 963 aaKnown RBP19.75■□□□□ 0.75
SUMO1-208ENST00000409627 HAND2P61296 217 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 NECTIN1Q15223 517 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 TATDN1Q6P1N9 297 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 C2orf69Q8N8R5 385 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 NBPF3Q9H094 633 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 ZNF287Q9HBT7 754 aa19.75■□□□□ 0.75
SUMO1-208ENST00000409627 ANGEL1Q9UNK9 670 aaKnown RBP19.75■□□□□ 0.75
SUMO1-208ENST00000409627 PHF20L1A8MW92 1017 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 CYP21A2P08686 494 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 FGRP09769 529 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 PCP11498 1178 aaKnown RBP19.74■□□□□ 0.75
SUMO1-208ENST00000409627 CDK8P49336 464 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 PDE4BQ07343 736 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 PRKG1Q13976 671 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 TTLL12Q14166 644 aaPredicted RBP19.74■□□□□ 0.75
SUMO1-208ENST00000409627 SLC44A5Q8NCS7 719 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.74■□□□□ 0.75
SUMO1-208ENST00000409627 STAG1Q8WVM7 1258 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 FZD1Q9UP38 647 aa19.74■□□□□ 0.75
SUMO1-208ENST00000409627 GREB1LQ9C091 1923 aaPredicted RBP19.73■□□□□ 0.75
SUMO1-208ENST00000409627 UNCXA6NJT0 531 aa19.73■□□□□ 0.75
SUMO1-208ENST00000409627 TBC1D10CQ8IV04 446 aa19.73■□□□□ 0.75
SUMO1-208ENST00000409627 WRNIP1Q96S55 665 aa19.73■□□□□ 0.75
SUMO1-208ENST00000409627 USP26Q9BXU7 913 aa19.73■□□□□ 0.75
SUMO1-208ENST00000409627 RNF41Q9H4P4 317 aaPredicted RBP19.73■□□□□ 0.75
SUMO1-208ENST00000409627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
SUMO1-208ENST00000409627 TMEM88BA6NKF7 163 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 SLC27A2O14975 620 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 SEC24BO95487 1268 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 HSPA4P34932 840 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 AKNAD1Q5T1N1 836 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 MOB2Q70IA6 237 aa19.72■□□□□ 0.75
SUMO1-208ENST00000409627 ORC4O43929 436 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 CTNND1O60716 968 aaKnown RBP19.71■□□□□ 0.75
SUMO1-208ENST00000409627 CAP2P40123 477 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 NT5C2P49902 561 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 APLP1P51693 650 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 MAP3K9P80192 1104 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 RRP1BQ14684 758 aaKnown RBP19.71■□□□□ 0.75
SUMO1-208ENST00000409627 CERKLQ49MI3 558 aaPredicted RBP19.71■□□□□ 0.75
SUMO1-208ENST00000409627 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
SUMO1-208ENST00000409627 LDLRAD1Q5T700 205 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 MFSD6Q6ZSS7 791 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 ANKRD13AQ8IZ07 590 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 STK11IPQ8N1F8 1099 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 MKNK2Q9HBH9 465 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 TACC3Q9Y6A5 838 aa19.71■□□□□ 0.75
SUMO1-208ENST00000409627 UBE2Q2LH0YL09 131 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 RASA1P20936 1047 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 INPP5BP32019 993 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.7■□□□□ 0.74
SUMO1-208ENST00000409627 KCNB2Q92953 911 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms