RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 FAM163AQ96GL9 167 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 ABCF2Q9UG63 623 aa15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 AGTPBP1Q9UPW5 1226 aa15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-205ENST00000409542 DLL1O00548 723 aa15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHRNA1-205ENST00000409542 MROH7-TTC4A0A0A0MT08 1334 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 A0A1W2PPC1 479 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 ZBTB22O15209 634 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 MECOMQ03112 1051 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 FAM110CQ1W6H9 321 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 COA7Q96BR5 231 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 GDF15Q99988 308 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 GJD2Q9UKL4 321 aa15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
CHRNA1-205ENST00000409542 PLXNB2O15031 1838 aa15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 GPR75-ASB3A0A0A6YYF3 556 aa15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 TBC1D12O60347 775 aa15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 PEX10O60683 326 aa15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 SPP2Q13103 211 aa15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 ZGPATQ8N5A5 531 aaKnown RBP15.63■□□□□ 0.09
CHRNA1-205ENST00000409542 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 HMGCS2P54868 508 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 PI16Q6UXB8 463 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 NECAB2Q7Z6G3 386 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 C7orf61Q8IZ16 206 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 XAGE2Q96GT9 111 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 COPRSQ9NQ92 184 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 LOC285556D6RIA3 1793 aa15.62■□□□□ 0.09
CHRNA1-205ENST00000409542 A0A1B0GUL7 405 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 BCAR3O75815 825 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 TFCP2Q12800 502 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 TBC1D9Q6ZT07 1266 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 PROCA1Q8NCQ7 364 aaPredicted RBP15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 MEIS3Q99687 375 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 ATAD5Q96QE3 1844 aa15.61■□□□□ 0.09
CHRNA1-205ENST00000409542 PDS5AQ29RF7 1337 aaKnown RBP15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 SYN1P17600 705 aa15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 SLF2Q8IX21 1173 aa15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 ZNF280CQ8ND82 737 aa15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 OSBPL5Q9H0X9 879 aaPredicted RBP15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 ASCC2Q9H1I8 757 aaPredicted RBP15.6■□□□□ 0.09
CHRNA1-205ENST00000409542 HMGCRP04035 888 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 CAPN2P17655 700 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 PDE4AP27815 886 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 BMP8BP34820 402 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 CAP2P40123 477 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 JAG1P78504 1218 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 Q7L0L9 218 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 TRIB2Q92519 343 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 BACH2Q9BYV9 841 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 HMG20BQ9P0W2 317 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 PNMA3Q9UL41 463 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 DDX60LQ5H9U9 1706 aaKnown RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 RPTORQ8N122 1335 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 AAMPQ13685 434 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 ANKLE1Q8NAG6 615 aa15.59■□□□□ 0.09
CHRNA1-205ENST00000409542 USP17L5A8MUK1 530 aa15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 CYP2B6P20813 491 aa15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 RARSP54136 660 aaKnown RBP15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 SH3D19Q5HYK7 790 aa15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 TXNRD2Q9NNW7 524 aa15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 HMX1Q9NP08 348 aaPredicted RBP15.58■□□□□ 0.08
CHRNA1-205ENST00000409542 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 MAGEA10P43363 369 aaPredicted RBP15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 DEFB123Q8N688 67 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 NEUROD6Q96NK8 337 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 P2RX7Q99572 595 aaKnown RBP15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 NBPF3Q9H094 633 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 MORF4L1Q9UBU8 362 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 OGDHLQ9ULD0 1010 aa15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
CHRNA1-205ENST00000409542 PFASO15067 1338 aa15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 MAP3K21Q5TCX8 1036 aa15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 POTEEQ6S8J3 1075 aa15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 SPATA5Q8NB90 893 aa15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 SH3RF3Q8TEJ3 882 aaPredicted RBP15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
CHRNA1-205ENST00000409542 DNAH12Q6ZR08 3092 aa15.55■□□□□ 0.08
CHRNA1-205ENST00000409542 MTMR2Q13614 643 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms