RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 STAG1Q8WVM7 1258 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 KCNB2Q92953 911 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 IL17RAQ96F46 866 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 KRT23Q9C075 422 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 TMEM39BQ9GZU3 492 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 TOMM22Q9NS69 142 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
AP1S3-204ENST00000409375 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
AP1S3-204ENST00000409375 CTDSPL2Q05D32 466 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 DCAF15Q66K64 600 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 C16orf86Q6ZW13 317 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 NCOA7Q8NI08 942 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 MKNK2Q9HBH9 465 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
AP1S3-204ENST00000409375 E7EWF7 191 aa18.08■□□□□ 0.48
AP1S3-204ENST00000409375 CYP2D6P10635 497 aa18.08■□□□□ 0.48
AP1S3-204ENST00000409375 NF2P35240 595 aa18.08■□□□□ 0.48
AP1S3-204ENST00000409375 PLCD1P51178 756 aa18.08■□□□□ 0.48
AP1S3-204ENST00000409375 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.48
AP1S3-204ENST00000409375 TBC1D12O60347 775 aa18.07■□□□□ 0.48
AP1S3-204ENST00000409375 ESR2Q92731 530 aa18.07■□□□□ 0.48
AP1S3-204ENST00000409375 NEK1Q96PY6 1258 aa18.07■□□□□ 0.48
AP1S3-204ENST00000409375 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
AP1S3-204ENST00000409375 POLR2AP24928 1970 aaKnown RBP18.07■□□□□ 0.48
AP1S3-204ENST00000409375 MYH8P13535 1937 aa18.07■□□□□ 0.48
AP1S3-204ENST00000409375 ORC4O43929 436 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 CDK8P49336 464 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 SH3BP5LQ7L8J4 393 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 TBC1D10CQ8IV04 446 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
AP1S3-204ENST00000409375 ZNF444Q8N0Y2 327 aaPredicted RBP18.06■□□□□ 0.48
AP1S3-204ENST00000409375 JAKMIP1Q96N16 626 aaKnown RBP18.06■□□□□ 0.48
AP1S3-204ENST00000409375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.06■□□□□ 0.48
AP1S3-204ENST00000409375 FGRP09769 529 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 YY1P25490 414 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 GABPAQ06546 454 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 RRP12Q5JTH9 1297 aaKnown RBP18.05■□□□□ 0.48
AP1S3-204ENST00000409375 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
AP1S3-204ENST00000409375 DYNLL2Q96FJ2 89 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 CCDC17Q96LX7 622 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
AP1S3-204ENST00000409375 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
AP1S3-204ENST00000409375 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
AP1S3-204ENST00000409375 RABEP1Q15276 862 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 CCDC178Q5BJE1 867 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 USP48Q86UV5 1035 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 STK11IPQ8N1F8 1099 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 TEPSINQ96N21 525 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 KIF2CQ99661 725 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 NBPF3Q9H094 633 aa18.04■□□□□ 0.48
AP1S3-204ENST00000409375 SIPA1L1O43166 1804 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 ADM5C9JUS6 153 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 PPP1R12BO60237 982 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-204ENST00000409375 RANBP6O60518 1105 aaKnown RBP18.03■□□□□ 0.48
AP1S3-204ENST00000409375 MCM5P33992 734 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
AP1S3-204ENST00000409375 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
AP1S3-204ENST00000409375 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 IQCA1Q86XH1 822 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 ZNF341Q9BYN7 854 aa18.03■□□□□ 0.48
AP1S3-204ENST00000409375 NEDD4P46934 1319 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 WDR19Q8NEZ3 1342 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 ERICH2A1L162 156 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 B4E1Z4 1266 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 PRDM1O75626 825 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 MAP3K10Q02779 954 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 ADCK5Q3MIX3 580 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 MAP1SQ66K74 1059 aaPredicted RBP18.02■□□□□ 0.48
AP1S3-204ENST00000409375 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 MTA3Q9BTC8 594 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 GLIS2Q9BZE0 524 aaPredicted RBP18.02■□□□□ 0.48
AP1S3-204ENST00000409375 ZSWIM6Q9HCJ5 1215 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 CABP5Q9NP86 173 aa18.02■□□□□ 0.48
AP1S3-204ENST00000409375 SCAF8Q9UPN6 1271 aaKnown RBP18.02■□□□□ 0.48
AP1S3-204ENST00000409375 UTRNP46939 3433 aa18.02■□□□□ 0.47
AP1S3-204ENST00000409375 ST18O60284 1047 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 KDM4AO75164 1064 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 POTEJP0CG39 1038 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 RASA1P20936 1047 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 FGD1P98174 961 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 CERKLQ49MI3 558 aaPredicted RBP18.01■□□□□ 0.47
AP1S3-204ENST00000409375 TATDN1Q6P1N9 297 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 DHX32Q7L7V1 743 aaKnown RBP18.01■□□□□ 0.47
AP1S3-204ENST00000409375 SLC44A5Q8NCS7 719 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
AP1S3-204ENST00000409375 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms