RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SMARCC2Q8TAQ2 1214 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 DSCC1Q9BVC3 393 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 TRIM66O15016 1216 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 CTIFO43310 598 aaKnown RBP9.49□□□□□ -0.89
SNX13-201ENST00000409076 CDKL5O76039 1030 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 SMC1AQ14683 1233 aaKnown RBP9.49□□□□□ -0.89
SNX13-201ENST00000409076 HDAC6Q9UBN7 1215 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
SNX13-201ENST00000409076 SLFN14P0C7P3 912 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 EIF6P56537 245 aaKnown RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 RBL2Q08999 1139 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 FOXP4Q8IVH2 680 aaPredicted RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 MAN1B1Q9UKM7 699 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 RIN2Q8WYP3 895 aaPredicted RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 LLPHQ9BRT6 129 aaKnown RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 PARD6BQ9BYG5 372 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 MRPL44Q9H9J2 332 aaKnown RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 JADE2Q9NQC1 790 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 PLEKHG1Q9ULL1 1385 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 TRIM49BA6NDI0 452 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 IDEP14735 1019 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 CCDC178Q5BJE1 867 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 SLC35F6Q8N357 371 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 ZNF274Q96GC6 653 aaPredicted RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 GPR101Q96P66 508 aaPredicted RBP9.48□□□□□ -0.89
SNX13-201ENST00000409076 NACAP1Q9BZK3 213 aa9.48□□□□□ -0.89
SNX13-201ENST00000409076 ATP2C2O75185 946 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 GPS2Q13227 327 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 CXCR5P32302 372 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 UBXN1Q04323 297 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 SLC39A14Q15043 492 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
SNX13-201ENST00000409076 IFNL3Q8IZI9 196 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 AATFQ9NY61 560 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX13-201ENST00000409076 SAP30BPQ9UHR5 308 aaKnown RBP9.47□□□□□ -0.89
SNX13-201ENST00000409076 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
SNX13-201ENST00000409076 CEMIPQ8WUJ3 1361 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 MYO1BO43795 1136 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 CHMP4BP1P59074 171 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 LEKR1Q6ZMV7 388 aa9.47□□□□□ -0.89
SNX13-201ENST00000409076 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
SNX13-201ENST00000409076 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX13-201ENST00000409076 KIF20AO95235 890 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 CMA1P23946 247 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 CYP27A1Q02318 531 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.89
SNX13-201ENST00000409076 BRAPQ7Z569 592 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.89
SNX13-201ENST00000409076 HPS3Q969F9 1004 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 SMARCAL1Q9NZC9 954 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 GDAQ9Y2T3 454 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 ANKRD26Q9UPS8 1709 aa9.46□□□□□ -0.89
SNX13-201ENST00000409076 AKR1B15C9JRZ8 316 aaPredicted RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 F8W031 263 aaPredicted RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 DEF6Q9H4E7 631 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 TRIM75PA6NK02 468 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 TSPY2A6NKD2 308 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 IPO7O95373 1038 aaKnown RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 STARD3NLO95772 234 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 CCDC175P0C221 793 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 NOSTRINQ8IVI9 506 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 KANSL2Q9H9L4 492 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 TBC1D7Q9P0N9 293 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.9
SNX13-201ENST00000409076 FAN1Q9Y2M0 1017 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
SNX13-201ENST00000409076 SYNRGQ9UMZ2 1314 aa9.46□□□□□ -0.9
SNX13-201ENST00000409076 YEATS4O95619 227 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 CYP2D6P10635 497 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 KRT9P35527 623 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 RASGRP2Q7LDG7 609 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 HEATR3Q7Z4Q2 680 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 GOLGA1Q92805 767 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNX13-201ENST00000409076 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 RASGRF1Q13972 1273 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 NCAPHQ15003 741 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 EARS2Q5JPH6 523 aaKnown RBP9.45□□□□□ -0.9
SNX13-201ENST00000409076 ANKRD20A12PQ8NF67 263 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 BABAM1Q9NWV8 329 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 SASH3O75995 380 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 SLC5A1P13866 664 aa9.45□□□□□ -0.9
SNX13-201ENST00000409076 IGHMBP2P38935 993 aaKnown RBP9.45□□□□□ -0.9
SNX13-201ENST00000409076 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms