RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HINFPQ9BQA5 517 aa14.47□□□□□ -0.09
HERC3-203ENST00000407637 NAA15Q9BXJ9 866 aaKnown RBP14.47□□□□□ -0.09
HERC3-203ENST00000407637 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
HERC3-203ENST00000407637 SSBP05455 408 aaKnown RBP eCLIP14.46□□□□□ -0.09
HERC3-203ENST00000407637 GRIK3Q13003 919 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 NR1I3Q14994 352 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 NAA25Q14CX7 972 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 BEND3Q5T5X7 828 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 DHX32Q7L7V1 743 aaKnown RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 CHST3Q7LGC8 479 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 ZNF483Q8TF39 744 aaPredicted RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 RRP36Q96EU6 259 aaKnown RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 C8orf76Q96K31 380 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 CAPZA3Q96KX2 299 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 HPSEQ9Y251 543 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 LRRC37A3O60309 1634 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 MFAP3LO75121 409 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 PDIA3P30101 505 aaKnown RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
HERC3-203ENST00000407637 E2F5Q15329 346 aa14.46□□□□□ -0.09
HERC3-203ENST00000407637 C3P01024 1663 aa14.46□□□□□ -0.1
HERC3-203ENST00000407637 ZEB2O60315 1214 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SRGAP2O75044 1071 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SASH1O94885 1247 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 ATP1A2P50993 1020 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 CDR1P51861 262 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SNCBQ16143 134 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SPATS2Q86XZ4 545 aaKnown RBP14.45□□□□□ -0.1
HERC3-203ENST00000407637 TRIM10Q9UDY6 481 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 ZNF609O15014 1411 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 TARSL2A2RTX5 802 aaKnown RBP14.45□□□□□ -0.1
HERC3-203ENST00000407637 PI4KAP2A4QPH2 592 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 GOLGA8KD6RF30 607 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SF3B2Q13435 895 aaKnown RBP14.45□□□□□ -0.1
HERC3-203ENST00000407637 TTMPQ5BVD1 217 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 TRAPPC11Q7Z392 1133 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 PI4KAP1Q8N8J0 262 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 ARL8AQ96BM9 186 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SCLT1Q96NL6 688 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 NDUFB9Q9Y6M9 179 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 A0A1B0GTH6 734 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 CASP14P31944 242 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 ZKSCAN8Q15776 578 aaPredicted RBP14.45□□□□□ -0.1
HERC3-203ENST00000407637 NAA35Q5VZE5 725 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 CCNI2Q6ZMN8 369 aaPredicted RBP14.45□□□□□ -0.1
HERC3-203ENST00000407637 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
HERC3-203ENST00000407637 FAM228AQ86W67 206 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 SH3BP1Q9Y3L3 701 aa14.45□□□□□ -0.1
HERC3-203ENST00000407637 NCAPD2Q15021 1401 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 GCKP35557 465 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 SKOR1P84550 965 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 TEFQ10587 303 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 MICALCLQ6ZW33 695 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 BRAPQ7Z569 592 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 MED15Q96RN5 788 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 MAN1B1Q9UKM7 699 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 RPSAP08865 295 aaKnown RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 EZRP15311 586 aaKnown RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 EIF2S2P20042 333 aaKnown RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 ERVK-24P63145 666 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 SLC39A14Q15043 492 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 AP1ARQ63HQ0 302 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 TLDC1Q6P9B6 456 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 YTHDF3Q7Z739 585 aaKnown RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
HERC3-203ENST00000407637 PARP9Q8IXQ6 854 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 MYO1AQ9UBC5 1043 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 TAOK2Q9UL54 1235 aa14.44□□□□□ -0.1
HERC3-203ENST00000407637 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 FXR1P51114 621 aaKnown RBP eCLIP14.43□□□□□ -0.1
HERC3-203ENST00000407637 AENQ8WTP8 325 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 GUCA1BQ9UMX6 200 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 CEMIPQ8WUJ3 1361 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 ALKQ9UM73 1620 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 ATP1A1P05023 1023 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 HMGB1P09429 215 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 PDE6BP35913 854 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 HDGFP51858 240 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 KIF23Q02241 960 aaPredicted RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 IFT88Q13099 833 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 PLCB4Q15147 1175 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 CYB5D1Q6P9G0 228 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 ENOX1Q8TC92 643 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 ZNF473Q8WTR7 871 aaKnown RBP14.43□□□□□ -0.1
HERC3-203ENST00000407637 KIF9Q9HAQ2 790 aa14.43□□□□□ -0.1
HERC3-203ENST00000407637 PEX19P40855 299 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 CCDC102BQ68D86 513 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 TATDN2Q93075 761 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 AGXT2Q9BYV1 514 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 GPHNQ9NQX3 736 aaPredicted RBP14.42□□□□□ -0.1
HERC3-203ENST00000407637 FAM184BQ9ULE4 1060 aa14.42□□□□□ -0.1
HERC3-203ENST00000407637 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
HERC3-203ENST00000407637 KDM6AO15550 1401 aaPredicted RBP14.42□□□□□ -0.1
HERC3-203ENST00000407637 ANXA1P04083 346 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms