RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 MDM2Q00987 491 aaPredicted RBP21.2■□□□□ 0.98
EWSR1-207ENST00000406548 PDE4BQ07343 736 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 TRIM22Q8IYM9 498 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 NHSL1Q5SYE7 1610 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 TMEM232C9JQI7 657 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 FOXN1O15353 648 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 RTN1Q16799 776 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 SPECC1Q5M775 1068 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
EWSR1-207ENST00000406548 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 FBXO2Q9UK22 296 aaPredicted RBP21.2■□□□□ 0.98
EWSR1-207ENST00000406548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.2■□□□□ 0.982e-8■■■■□ 19.6
EWSR1-207ENST00000406548 SLIT2O94813 1529 aa21.2■□□□□ 0.98
EWSR1-207ENST00000406548 GABPB1Q06547 395 aaPredicted RBP21.19■□□□□ 0.98
EWSR1-207ENST00000406548 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 PTPREP23469 700 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 TDO2P48775 406 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 WTAPQ15007 396 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 SART3Q15020 963 aaKnown RBP21.19■□□□□ 0.98
EWSR1-207ENST00000406548 POSTNQ15063 836 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 RILPL1Q5EBL4 403 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 RRP12Q5JTH9 1297 aaKnown RBP21.19■□□□□ 0.98
EWSR1-207ENST00000406548 FCHSD1Q86WN1 690 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 ZNF34Q8IZ26 560 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 KRT222Q8N1A0 295 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 FOXP1Q9H334 677 aaPredicted RBP21.19■□□□□ 0.98
EWSR1-207ENST00000406548 INTS13Q9NVM9 706 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 MAN1B1Q9UKM7 699 aa21.19■□□□□ 0.98
EWSR1-207ENST00000406548 PRKAB2O43741 272 aa21.18■□□□□ 0.98
EWSR1-207ENST00000406548 KIF20AO95235 890 aa21.18■□□□□ 0.98
EWSR1-207ENST00000406548 LRRN4CLQ8ND94 238 aa21.18■□□□□ 0.98
EWSR1-207ENST00000406548 AK7Q96M32 723 aa21.18■□□□□ 0.98
EWSR1-207ENST00000406548 NACAP1Q9BZK3 213 aa21.18■□□□□ 0.98
EWSR1-207ENST00000406548 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 DEXIO95424 95 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 GNAT2P19087 354 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 ERCC6LQ2NKX8 1250 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 LCORLQ8N3X6 602 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 ZKSCAN3Q9BRR0 538 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 DNAI1Q9UI46 699 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 PLCH1Q4KWH8 1693 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 IL6STP40189 918 aaPredicted RBP21.17■□□□□ 0.98
EWSR1-207ENST00000406548 GRIN1Q05586 938 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 GOLGA8FQ08AF8 430 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 GOLGA8DPQ0D2H9 430 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 NT5DC1Q5TFE4 455 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 TRIM65Q6PJ69 517 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 UTP14AQ9BVJ6 771 aaKnown RBP21.17■□□□□ 0.98
EWSR1-207ENST00000406548 FAM53CQ9NYF3 392 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 SLC4A4Q9Y6R1 1079 aa21.17■□□□□ 0.98
EWSR1-207ENST00000406548 SNAP23O00161 211 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 NPHP1O15259 732 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 H2AFXP16104 143 aaPredicted RBP21.16■□□□□ 0.98
EWSR1-207ENST00000406548 PTPN21Q16825 1174 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 REXO1L1PQ8IX06 675 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 MTA3Q9BTC8 594 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 ERICH2A1L162 156 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 POLR2DO15514 142 aaKnown RBP21.16■□□□□ 0.98
EWSR1-207ENST00000406548 ARHGAP6O43182 974 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 TMEM139Q8IV31 216 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 DACH1Q9UI36 760 aa21.16■□□□□ 0.98
EWSR1-207ENST00000406548 CCDC196A0A1B0GTZ2 297 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 ZSCAN12O43309 604 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 PRR29P0C7W0 189 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 RCAN1P53805 252 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 TBX2Q13207 712 aaPredicted RBP21.15■□□□□ 0.98
EWSR1-207ENST00000406548 CRACR2BQ8N4Y2 399 aaPredicted RBP21.15■□□□□ 0.98
EWSR1-207ENST00000406548 ZNF579Q8NAF0 562 aaKnown RBP21.15■□□□□ 0.98
EWSR1-207ENST00000406548 MLKLQ8NB16 471 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 MPHOSPH8Q99549 860 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 SERTAD1Q9UHV2 236 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 DISP2A7MBM2 1401 aa21.15■□□□□ 0.98
EWSR1-207ENST00000406548 SMARCE1Q969G3 411 aa21.14■□□□□ 0.98
EWSR1-207ENST00000406548 ZNF446Q9NWS9 450 aa21.14■□□□□ 0.98
EWSR1-207ENST00000406548 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.98
EWSR1-207ENST00000406548 ZNF18P17022 549 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 SARSP49591 514 aaKnown RBP21.14■□□□□ 0.97
EWSR1-207ENST00000406548 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.972e-6■■□□□ 13.2
EWSR1-207ENST00000406548 NR5A1Q13285 461 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 MORC3Q14149 939 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 TMTC2Q8N394 836 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 RNF41Q9H4P4 317 aaPredicted RBP21.14■□□□□ 0.97
EWSR1-207ENST00000406548 CEP131Q9UPN4 1083 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 NFE2L3Q9Y4A8 694 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 MYH6P13533 1939 aa21.14■□□□□ 0.97
EWSR1-207ENST00000406548 IGSF3O75054 1194 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 HSP90AA4PQ58FG1 418 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 ZNF654Q8IZM8 581 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 CMTR1Q8N1G2 835 aaKnown RBP21.13■□□□□ 0.97
EWSR1-207ENST00000406548 CCDC82Q8N4S0 544 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 TRIML1Q8N9V2 468 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 ENOX1Q8TC92 643 aaKnown RBP21.13■□□□□ 0.97
EWSR1-207ENST00000406548 NOL10Q9BSC4 688 aaKnown RBP21.13■□□□□ 0.97
EWSR1-207ENST00000406548 SRPRBQ9Y5M8 271 aaKnown RBP21.13■□□□□ 0.97
EWSR1-207ENST00000406548 KAT6BQ8WYB5 2073 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 SRRTQ9BXP5 876 aaKnown RBP21.13■□□□□ 0.97
EWSR1-207ENST00000406548 SEC31BQ9NQW1 1179 aa21.13■□□□□ 0.97
EWSR1-207ENST00000406548 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms