RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
PRAME-205ENST00000405655 UBAC1Q9BSL1 405 aa16.42■□□□□ 0.22
PRAME-205ENST00000405655 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
PRAME-205ENST00000405655 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
PRAME-205ENST00000405655 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
PRAME-205ENST00000405655 LIFRP42702 1097 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 SCNN1DP51172 638 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 DBNDD1Q9H9R9 158 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 MKRN1Q9UHC7 482 aaKnown RBP16.41■□□□□ 0.22
PRAME-205ENST00000405655 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
PRAME-205ENST00000405655 LAMB1P07942 1786 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 MYH6P13533 1939 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 SLC15A2Q16348 729 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 MPNDQ8N594 471 aa16.41■□□□□ 0.22
PRAME-205ENST00000405655 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
PRAME-205ENST00000405655 NR1I2O75469 434 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 NPR1P16066 1061 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 C15orf52Q6ZUT6 534 aaKnown RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 ESR2Q92731 530 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■■□□□ 11.9
PRAME-205ENST00000405655 A0A087WWV3 80 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 USP17L3A6NCW0 530 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 USP17L4A6NCW7 530 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 RTN1Q16799 776 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 KRT40Q6A162 431 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 USP17L1Q7RTZ2 530 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
PRAME-205ENST00000405655 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
PRAME-205ENST00000405655 MROH7-TTC4A0A0A0MT08 1334 aa16.39■□□□□ 0.21
PRAME-205ENST00000405655 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
PRAME-205ENST00000405655 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
PRAME-205ENST00000405655 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
PRAME-205ENST00000405655 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
PRAME-205ENST00000405655 SCN9AQ15858 1988 aa16.39■□□□□ 0.21
PRAME-205ENST00000405655 ERICH2A1L162 156 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
PRAME-205ENST00000405655 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 ERCC4Q92889 916 aaPredicted RBP16.38■□□□□ 0.21
PRAME-205ENST00000405655 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
PRAME-205ENST00000405655 IL17RBQ9NRM6 502 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
PRAME-205ENST00000405655 ADAMTS3O15072 1205 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 PDE6BP35913 854 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 PICALMQ13492 652 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 SART3Q15020 963 aaKnown RBP16.37■□□□□ 0.21
PRAME-205ENST00000405655 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
PRAME-205ENST00000405655 SYNE3Q6ZMZ3 975 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 ZC3H12CQ9C0D7 883 aaKnown RBP16.37■□□□□ 0.21
PRAME-205ENST00000405655 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 FGRP09769 529 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 RHBDL3P58872 404 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
PRAME-205ENST00000405655 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 OXER1Q8TDS5 423 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 TSPY26PQ9H489 355 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 MYH1P12882 1939 aa16.37■□□□□ 0.21
PRAME-205ENST00000405655 ELP1O95163 1332 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 TFAP4Q01664 338 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 RCSD1Q6JBY9 416 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
PRAME-205ENST00000405655 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
PRAME-205ENST00000405655 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
PRAME-205ENST00000405655 NOM1Q5C9Z4 860 aaKnown RBP16.36■□□□□ 0.21
PRAME-205ENST00000405655 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
PRAME-205ENST00000405655 DLEC1Q9Y238 1755 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 BTBD18B2RXH4 712 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 ME1P48163 572 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 CACNB3P54284 484 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 TROAPQ12815 778 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 NR5A1Q13285 461 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 CCAR1Q8IX12 1150 aaKnown RBP16.35■□□□□ 0.21
PRAME-205ENST00000405655 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
PRAME-205ENST00000405655 PCDHA7Q9UN72 937 aa16.35■□□□□ 0.21
PRAME-205ENST00000405655 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 IFNAR1P17181 557 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 PPP4CP60510 307 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms