RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 LTBP4Q8N2S1 1624 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 SYKP43405 635 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 FOSBP53539 338 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 NPY5RQ15761 445 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 PKN1Q16512 942 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 TPD52L1Q16890 204 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 PARP10Q53GL7 1025 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 PPP4R3BQ5MIZ7 849 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 SYNE3Q6ZMZ3 975 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 DZIP3Q86Y13 1208 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 DRC7Q8IY82 874 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 TMTC2Q8N394 836 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 ERO1AQ96HE7 468 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 CDCA7Q9BWT1 371 aaPredicted RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 OGFRQ9NZT2 677 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 IFNKQ9P0W0 207 aa4.46□□□□□ -1.7
RTN4-209ENST00000405240 TRMT112Q9UI30 125 aaKnown RBP4.46□□□□□ -1.7
RTN4-209ENST00000405240 BECN2A8MW95 431 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 UBE2Q2LH0YL09 131 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 IGSF3O75054 1194 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PCP11498 1178 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 H2AFXP16104 143 aaPredicted RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 GUCY1A2P33402 732 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PBX1P40424 430 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 IARSP41252 1262 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 PDE4BQ07343 736 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 TRDNQ13061 729 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PTPN14Q15678 1187 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 KRI1Q8N9T8 703 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 DPF2Q92785 391 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 SDF4Q9BRK5 362 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PHF20Q9BVI0 1012 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 GTPBP4Q9BZE4 634 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 INCENPQ9NQS7 918 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CNNM1Q9NRU3 951 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 ATAD5Q96QE3 1844 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 FAM177BA6PVY3 158 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CPLX1O14810 134 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 MBD4O95243 580 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 DEXIO95424 95 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 EVA1CP58658 441 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 MYL5Q02045 173 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CTDSPL2Q05D32 466 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 SF3B3Q15393 1217 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 RILPL1Q5EBL4 403 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 TAF7LQ5H9L4 462 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 TMEM67Q5HYA8 995 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 ADGRA1Q86SQ6 560 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 LCORLQ8N3X6 602 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 MAGEB6Q8N7X4 407 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CCDC112Q8NEF3 446 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 KIF18AQ8NI77 898 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 ENOX1Q8TC92 643 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 ZNF384Q8TF68 577 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PHKBQ93100 1093 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 BTG4Q9NY30 223 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 AATFQ9NY61 560 aaKnown RBP eCLIP4.45□□□□□ -1.7
RTN4-209ENST00000405240 MAN1B1Q9UKM7 699 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 KCNH3Q9ULD8 1083 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 SPATA31A1Q5TZJ5 1347 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 GOLGA8AA7E2F4 631 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PRPF3O43395 683 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 CBFA2T2O43439 604 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 GPTP24298 496 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 PNOCQ13519 176 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 NR1I3Q14994 352 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 AIDAQ96BJ3 306 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CLIC6Q96NY7 704 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 UTP14AQ9BVJ6 771 aaKnown RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 STRN4Q9NRL3 753 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 CCDC87Q9NVE4 849 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.45□□□□□ -1.7
RTN4-209ENST00000405240 MYH8P13535 1937 aa4.45□□□□□ -1.7
RTN4-209ENST00000405240 GREB1LQ9C091 1923 aaPredicted RBP4.45□□□□□ -1.7
RTN4-209ENST00000405240 ZNF646O15015 1829 aaPredicted RBP4.44□□□□□ -1.7
RTN4-209ENST00000405240 PPFIA3O75145 1194 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 ATP1A3P13637 1013 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 ERCC5P28715 1186 aaPredicted RBP4.44□□□□□ -1.7
RTN4-209ENST00000405240 MARCKSP29966 332 aaPredicted RBP4.44□□□□□ -1.7
RTN4-209ENST00000405240 NT5C2P49902 561 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 HSPA2P54652 639 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 MLKLQ8NB16 471 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 ZNF397Q8NF99 534 aaPredicted RBP4.44□□□□□ -1.7
RTN4-209ENST00000405240 UBXN6Q9BZV1 441 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 ARMT1Q9H993 441 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 SEC31BQ9NQW1 1179 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 PCDHA5Q9Y5H7 936 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 SLC12A7Q9Y666 1083 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 A0A1B0GTH6 734 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 CCP110O43303 1012 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 PRKAB2O43741 272 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 FAM193AP78312 1265 aa4.44□□□□□ -1.7
RTN4-209ENST00000405240 GRIN1Q05586 938 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 511.4 ms