RNA–Protein interactions for RNA: ENST00000405234.1

TUBBP9-201, Transcript of tubulin beta class I pseudogene 9, humanhuman

BASIC

Gene TUBBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP9-201ENST00000405234 SKIV2LQ15477 1246 aaKnown RBP10.81□□□□□ -0.68
TUBBP9-201ENST00000405234 ATG9AQ7Z3C6 839 aa10.81□□□□□ -0.68
TUBBP9-201ENST00000405234 CTU1Q7Z7A3 348 aaKnown RBP10.81□□□□□ -0.68
TUBBP9-201ENST00000405234 WNK4Q96J92 1243 aa10.81□□□□□ -0.68
TUBBP9-201ENST00000405234 SIL1Q9H173 461 aa10.81□□□□□ -0.68
TUBBP9-201ENST00000405234 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 IREB2P48200 963 aaKnown RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 RARSP54136 660 aaKnown RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 CACNB3P54284 484 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 INHBEP58166 350 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 FUT2Q10981 343 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 PUM3Q15397 648 aaKnown RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 LPIN2Q92539 896 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 TEPSINQ96N21 525 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 API5Q9BZZ5 524 aaKnown RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 TMEM39BQ9GZU3 492 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 COL1A1P02452 1464 aaPredicted RBP10.8□□□□□ -0.68
TUBBP9-201ENST00000405234 MANSC4A6NHS7 340 aaPredicted RBP10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 HOXA2O43364 376 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 SLC5A1P13866 664 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 GJA5P36382 358 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 TNNI2P48788 182 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 PTPN5P54829 565 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 HDLBPQ00341 1268 aaKnown RBP10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 TNFAIP1Q13829 316 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 TEKT1Q969V4 418 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 MEIS3Q99687 375 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 MRIQ9BWK5 157 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 PA2G4Q9UQ80 394 aaKnown RBP10.79□□□□□ -0.68
TUBBP9-201ENST00000405234 MOXD2PA6NHM9 499 aa10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 IGF2BP3O00425 579 aaKnown RBP eCLIP10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 FKTNO75072 461 aa10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 ZBTB48P10074 688 aaPredicted RBP10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
TUBBP9-201ENST00000405234 BCAR3O75815 825 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 IL15P40933 162 aaPredicted RBP10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 SOX10P56693 466 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 TIMM10P62072 90 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 HHIPL2Q6UWX4 724 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 NYAP1Q6ZVC0 841 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 WDR66Q8TBY9 1149 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 OPTNQ96CV9 577 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 ZDHHC15Q96MV8 337 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 PTPN18Q99952 460 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 CFHR5Q9BXR6 569 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 TNNQ9UQP3 1299 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 KIF16BQ96L93 1317 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
TUBBP9-201ENST00000405234 CIAO1O76071 339 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 FDX1P10109 184 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 NDUFV2P19404 249 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 CSPP1Q1MSJ5 1256 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 INTS3Q68E01 1043 aaKnown RBP10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 ARHGAP45Q92619 1136 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 RNF166Q96A37 237 aaPredicted RBP10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 COPRSQ9NQ92 184 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 SUGT1Q9Y2Z0 365 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 PCDHB3Q9Y5E6 796 aa10.76□□□□□ -0.69
TUBBP9-201ENST00000405234 SPTLC1O15269 473 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 ADORA1P30542 326 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 PHKA1P46020 1223 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 VGLL4Q14135 290 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 OTUD7BQ6GQQ9 843 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 MIGA2Q7L4E1 593 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 FAM83AQ86UY5 434 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 ZKSCAN4Q969J2 545 aaPredicted RBP10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 GNL3LQ9NVN8 582 aaKnown RBP10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
TUBBP9-201ENST00000405234 SRGAP3O43295 1099 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 GNAI3P08754 354 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 PRDX5P30044 214 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 TCP10Q12799 353 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 CDC42EP5Q6NZY7 148 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 FBXO46Q6PJ61 603 aaPredicted RBP10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 USP40Q9NVE5 1235 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 LIMD1Q9UGP4 676 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 DENND2AQ9ULE3 1009 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
TUBBP9-201ENST00000405234 CSADQ9Y600 493 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms