RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 LSG1Q9H089 658 aaKnown RBP10.65□□□□□ -0.7
NCOA1-204ENST00000405141 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 TXKP42681 527 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 ASIC2Q16515 512 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
NCOA1-204ENST00000405141 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 VPS54Q9P1Q0 977 aa10.65□□□□□ -0.7
NCOA1-204ENST00000405141 DISP1Q96F81 1524 aa10.65□□□□□ -0.71
NCOA1-204ENST00000405141 TTC19Q6DKK2 380 aaPredicted RBP10.65□□□□□ -0.71
NCOA1-204ENST00000405141 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.71
NCOA1-204ENST00000405141 PSMD1Q99460 953 aa10.65□□□□□ -0.71
NCOA1-204ENST00000405141 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 C11orf57Q6ZUT1 292 aaPredicted RBP10.64□□□□□ -0.71
NCOA1-204ENST00000405141 CCDC77Q9BR77 488 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 IBTKQ9P2D0 1353 aaPredicted RBP10.64□□□□□ -0.71
NCOA1-204ENST00000405141 KRT9P35527 623 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 RASEFQ8IZ41 740 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 APPBP2Q92624 585 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 PLVAPQ9BX97 442 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 GCP02774 474 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 DMTNQ08495 405 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ZSCAN26Q16670 478 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 DCAF5Q96JK2 942 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ZNF532Q9HCE3 1301 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ZNF804AQ7Z570 1209 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 USP44Q9H0E7 712 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 PCDHA7Q9UN72 937 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 CHMP2AO43633 222 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ACTN2P35609 894 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ZBTB16Q05516 673 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 SCRN1Q12765 414 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 GCKRQ14397 625 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ADALQ6DHV7 355 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 PLCD1P51178 756 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 EIF4A1P60842 406 aaKnown RBP10.64□□□□□ -0.71
NCOA1-204ENST00000405141 ST5P78524 1137 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 PTPROQ16827 1216 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 SEL1L2Q5TEA6 688 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
NCOA1-204ENST00000405141 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 GPR161Q8N6U8 529 aaKnown RBP10.64□□□□□ -0.71
NCOA1-204ENST00000405141 NOX5Q96PH1 765 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 SSH2Q76I76 1423 aa10.64□□□□□ -0.71
NCOA1-204ENST00000405141 GUCY2FP51841 1108 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 PLXNC1O60486 1568 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 IFT20Q8IY31 132 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 TLR7Q9NYK1 1049 aaKnown RBP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 MTRF1LQ9UGC7 380 aaKnown RBP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 SPDYE3A6NKU9 549 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 E7EVH7 732 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 CNNM4Q6P4Q7 775 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 B4GALNT4Q76KP1 1039 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 RSRC1Q96IZ7 334 aaKnown RBP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 TTC14Q96N46 770 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 ATP6V0A2Q9Y487 856 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 ZMYM3Q14202 1370 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 GNA11P29992 359 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 CCDC26Q8TAB7 109 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 FTOQ9C0B1 505 aaKnown RBP eCLIP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 ADCY9O60503 1353 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 IL2RBP14784 551 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 UAP1Q16222 522 aaPredicted RBP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 FANCLQ9NW38 375 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 UTP11Q9Y3A2 253 aaKnown RBP10.63□□□□□ -0.71
NCOA1-204ENST00000405141 KRT5P13647 590 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 TUBB2AQ13885 445 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 TUBB2BQ9BVA1 445 aa10.63□□□□□ -0.71
NCOA1-204ENST00000405141 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■■□□ 17.6
NCOA1-204ENST00000405141 BUB1BO60566 1050 aaPredicted RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 A1BGP04217 495 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 TUBBP07437 444 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 CEP104O60308 925 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 PUM3Q15397 648 aaKnown RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 NLRP3Q96P20 1036 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 FAM207AQ9NSI2 230 aaPredicted RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 PFKFB2O60825 505 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 LDHBP07195 334 aaKnown RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 WWC3Q9ULE0 1092 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 SYNMO15061 1565 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 LARGE1O95461 756 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 EPB41P11171 864 aaKnown RBP10.62□□□□□ -0.71
NCOA1-204ENST00000405141 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 DSCC1Q9BVC3 393 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 CALCOCO2Q13137 446 aa10.62□□□□□ -0.71
NCOA1-204ENST00000405141 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms