RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 CHADLQ6NUI6 762 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-204ENST00000404744 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 RNF41Q9H4P4 317 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-204ENST00000404744 ANAPC4Q9UJX5 808 aa18.69■□□□□ 0.58
CDPF1-204ENST00000404744 BAZ2AQ9UIF9 1905 aaKnown RBP18.68■□□□□ 0.58
CDPF1-204ENST00000404744 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
CDPF1-204ENST00000404744 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
CDPF1-204ENST00000404744 EHD4Q9H223 541 aa18.68■□□□□ 0.58
CDPF1-204ENST00000404744 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
CDPF1-204ENST00000404744 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
CDPF1-204ENST00000404744 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
CDPF1-204ENST00000404744 TRDNQ13061 729 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 DCAF15Q66K64 600 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 DYNLL2Q96FJ2 89 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDPF1-204ENST00000404744 SWAP70Q9UH65 585 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 TAOK2Q9UL54 1235 aa18.67■□□□□ 0.58
CDPF1-204ENST00000404744 KIF3CO14782 793 aa18.66■□□□□ 0.58
CDPF1-204ENST00000404744 KRT32Q14532 448 aa18.66■□□□□ 0.58
CDPF1-204ENST00000404744 AKNAD1Q5T1N1 836 aa18.66■□□□□ 0.58
CDPF1-204ENST00000404744 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
CDPF1-204ENST00000404744 TBC1D12O60347 775 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 PCP11498 1178 aaKnown RBP18.65■□□□□ 0.58
CDPF1-204ENST00000404744 EVX2Q03828 476 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 CDAN1Q8IWY9 1227 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 CNNM2Q9H8M5 875 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
CDPF1-204ENST00000404744 PPP1R12BO60237 982 aaPredicted RBP18.64■□□□□ 0.58
CDPF1-204ENST00000404744 CDK8P49336 464 aa18.64■□□□□ 0.58
CDPF1-204ENST00000404744 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.58
CDPF1-204ENST00000404744 RALYLQ86SE5 291 aaKnown RBP18.64■□□□□ 0.58
CDPF1-204ENST00000404744 TBC1D10CQ8IV04 446 aa18.64■□□□□ 0.58
CDPF1-204ENST00000404744 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.58
CDPF1-204ENST00000404744 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.58
CDPF1-204ENST00000404744 STAG1Q8WVM7 1258 aa18.64■□□□□ 0.58
CDPF1-204ENST00000404744 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.58
CDPF1-204ENST00000404744 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
CDPF1-204ENST00000404744 DDX60LQ5H9U9 1706 aaKnown RBP18.64■□□□□ 0.57
CDPF1-204ENST00000404744 E7EWF7 191 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 ANAPC15P60006 121 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 GABPAQ06546 454 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 KCNB2Q92953 911 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 KRT23Q9C075 422 aa18.64■□□□□ 0.57
CDPF1-204ENST00000404744 LAMB1P07942 1786 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 FAM196BA6NMK8 535 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 PRDM1O75626 825 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 TOMM70O94826 608 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 PSMA5P28066 241 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 TTLL12Q14166 644 aaPredicted RBP18.63■□□□□ 0.57
CDPF1-204ENST00000404744 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 DLK2Q6UY11 383 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
CDPF1-204ENST00000404744 SLC44A5Q8NCS7 719 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
CDPF1-204ENST00000404744 TRAF5O00463 557 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
CDPF1-204ENST00000404744 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
CDPF1-204ENST00000404744 PRKG1Q13976 671 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 ESR2Q92731 530 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 NBPF3Q9H094 633 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
CDPF1-204ENST00000404744 NT5C2P49902 561 aa18.61■□□□□ 0.57
CDPF1-204ENST00000404744 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
CDPF1-204ENST00000404744 CERKLQ49MI3 558 aaPredicted RBP18.61■□□□□ 0.57
CDPF1-204ENST00000404744 RBM46Q8TBY0 533 aaKnown RBP18.61■□□□□ 0.57
CDPF1-204ENST00000404744 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
CDPF1-204ENST00000404744 TBC1D32Q96NH3 1257 aa18.61■□□□□ 0.57
CDPF1-204ENST00000404744 CEP350Q5VT06 3117 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 LAMA4Q16363 1823 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 TSPY2A6NKD2 308 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 B4E1Z4 1266 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 ORC4O43929 436 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 FGRP09769 529 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 SLURP2P0DP57 97 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 SHMT1P34896 483 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 IREB2P48200 963 aaKnown RBP18.6■□□□□ 0.57
CDPF1-204ENST00000404744 TATDN1Q6P1N9 297 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 ARMC9Q7Z3E5 817 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 JAKMIP1Q96N16 626 aaKnown RBP18.6■□□□□ 0.57
CDPF1-204ENST00000404744 DNAJC18Q9H819 358 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 CABP5Q9NP86 173 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDPF1-204ENST00000404744 TAF6LQ9Y6J9 622 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 NEDD4P46934 1319 aa18.6■□□□□ 0.57
CDPF1-204ENST00000404744 MPHOSPH10O00566 681 aaKnown RBP18.59■□□□□ 0.57
CDPF1-204ENST00000404744 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
CDPF1-204ENST00000404744 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
CDPF1-204ENST00000404744 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
CDPF1-204ENST00000404744 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
CDPF1-204ENST00000404744 KDM4AO75164 1064 aa18.59■□□□□ 0.57
CDPF1-204ENST00000404744 ITGBL1O95965 494 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms